Detailed information of ANN33111-RA in Leptoseris scabra

Genomic Location: Scaffold_11__1_contigs__length_41608735:33337501...33347067
NR annotation: CAH3042456.1, unnamed protein product, partial [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B8VIU6Uncharacterized skeletal organic matrix protein 5 OS=Acropora millepora OX=45264 PE=1 SV=1
Q05120Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus OX=262177 GN=V-UBI PE=3 SV=1
P16709viral Ubiquitin OS=Autographa californica nuclear polyhedrosis virus OX=46015 GN=vUbi PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002020 (this species only)
Ubiquitin familyULD|UBL|NEDD8 · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240
all species →
ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626
all species →
DomainUbiquitin-like domainInterproscan
IPR029071
all species →
Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR019956
all species →
DomainUbiquitin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR36649
all species →
UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN33111-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP