Gene detail

Detailed information of ANN33159-RA in Montipora grisea

Genomic Location: Scaffold_789__1_contigs__length_73470:51826...56284
NR annotation: MCE2400215.1, CRTAC1 family protein [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN33159-RA

ATGGATATAAAGACCGTTGCTATTTACTCAACGGCAGACAAAGACGCTCTCCACGTTGAATACGCTGATGAGGCATACTGTATTGGGCCTCCGCCTTCCGCAGAAAGTTATCTTAAATATGCCAACATTACTGCTGTAGCGGACTTTGCCAATGTTGATGCGATACATCCTGGTGCTGGATTCCTTGCTGAAGACGCACAGTTTGCTGAAATTTGTGAAGCACATCAAATCAAATTCATTGGTCCCTCCATTGATGACCTCAATACTATGGGTGATAAGGTTCGCGCGCTTGAAACAGTCGCGAAGGCTGGTCTGAAACTTGTCCCCGGCAGTCAAAACAGGAAACGAAAAAAAGACAAAAGAGCCACCGTTGAATCCGCTGAAGAAGCAGCCGAACTCGCAGAAAAAATTGGATATCCGGTTGGAATCAAAGCATCCGCAGGTGGTGGTGGACGCGGCATTCGCATCGCCCACAATCGTCCCAGTCTGTTCAACTTATTCCATATCGCGAAATCTGAGAGCGAAGCCGCGTTTGGAAACGCTGATGTTTACATTGAAAAATGGATAGAAGATGCACGCCATATTGAAGTTCAGGTTTTAGGAGATTCTCACGGAAATGTTGTCCATTTCGGAGAACGTGAATGCTCCATCCAGCGCAAACAGCAAAAACTATTGGAAGAAGCCCCCGCTGCATCTATTTCCGCTAAACTTCGGAATGAAATTTGCAAAGCTGCTGTCAAAGCCGCTAAGTCAATCGGATACCTAAATGCTGGCACAATAGAGTTTGTCGTTGATAAGAACGAAAACTTCTATTTCCTTGAGATGAATACGCGTATTCAGGTTGAACACACTATCACCGAAAGCATCACCGGTATTGATCTAATTAAAGAACAGATTCGTCTGGCGATGGGAGAGGAACTTGGATACAACCAATCTGATATTCATATCAACGGACACGCGATTGAATGCAGAATCAATGCCGAAGACCCTGCCAATCAGTTTATGCCTTCACCAGGGTTAGTTACAGACTATCAACCCCCCGGTGGTATCGGCATTCGTGTTGACGGGTATATCTACACCGGCTATACGGTTCCCCCGCACTACGATTCACTCGTTGCAAAATTAATCGCTGTTGGTAGAGATCGTGACGAGGCAATTGCCCGATTGAAGCGAGCACTTTCCGAATTTAAGATTGAAGTGTTGATATTTATCACAATACATGCACTTGCACAACCCGCTACCTTTGTTGATGTAACACTCGAATCAGGCATACGTTTTCAGCACTCAAAAGGTTCGCGTTCCAGTTTACTGCCTGAAGATATGGGTTCTGGCGCAGGTTTTGCCGATATAGATAATGATGGGGACCTTGATCTCTATATTGTAAATATACCAGGACCATTCACAGAAACATCGCCCAAACCCACCTCACATTCCCCAAAAAACACTACAATACCTGCAAATATACTTTACCGGAATAATGGTAACGGCACATTTACTGACATTACAGATACTGCCAAGGTTGGAGATACAGGATACGGCATGGGCTGTGTCTTTGCAGATTACAATGGGGATGGTAATGTCGATCTCTATGTGACGAATTATGGAGCAAATGTGCTTTATCGAAACAACGGTAACGGCACATTTACTGATGTAACAAAGATTGCAGGAGTCGGTTGTCCGTTGTGGAGTACTGGTGCCGCATTCGCTGATTACGATGGGGACAACGATTTAGACCTATATGTTTGTAATTACCTCAAGTATGATCTGGAAAAGTTTGAACGGCAGAAAGAGGAATCCTTGCAATCCGGTAAATTCGTGCCAAATGCCCTGAATCCTACCGCCTTTGAACCACAAGAAAACGTATTTTACCGAAACAACGGTGACGGAACGTTTACTGATATTACTGCCGAAGCAGACGTAGCAGCACCCGGCGGTAGAAGTATGCAAGCCATTTTCAGCGACTTTGACAATGATAATGATATGGACCTGTACGTCGCAAACGATACTTCTGAAAACCACATCTTCCGAAACGAGGGAAATGGAACGTTTACCGATGTTAGTGCTGACTCATGGGCTGCGGACTTTCGCGGATCAATGGGTTTGGCTGCGGGGGATTACGATGCAGATGGAGATATTGACCTCTTTATCAGTCATTGGATAGATCAGGAATATGTTCTCTACAGAAATTTGTTGCAGGAAGACGAAGGAACACAAAAAAACAATCCTAAGCGCATCCGATTTGTAGATGAATCCTATTCTGCTATGCTTGCTGAAGTCACGTTGAAGGAAATTGGATGGGGCACCTCTCTCTTTGACTATGACAACGATGGGGATTTGGATATCTTTGTAGCAAACGGCAGCACATTCCAAAAACTTGACCAACCTGAAGTGCTTATCCCGCAACATAATCAGTTGTTTCGGAATGAAGGTGATGGAACTTTTAGTGATGTTAGTAAAAGCACGGGTATTTCCAATCTTCCTGCGCGTGTCAGCCGTGGCACTGCGTTTGGTGACTATGATAACGATGGGGATGTAGATATATTCATTAGCAATAACTATGACCGACCAACCCTATTGCAGAATAACGCCAACAATTTGAGTAACAGCAACAATTGGCTGCACGTTAAGTTAGTGGGTGAAAACCCAAATCCAGACGCTATCGGCGCGAAAATTCATCTCAAAACAGCAGATTCTGCCCAAATACGAGAAATTTACGCTGGTGAAAGTTACATGTCTGCTAACAGCTTTACTGCTGAATTCGGCCTGGGAAAAACCACTCAGGTTAAGATGCTGCAGGTTACCTGGACTAACGATTGTGTTTTATCTGCCATGAACACCAACTCTAAAACCTCCGCACAAACACTCTCTTCAACCTCACCAAAATCTGCCCTGTTGACAGAATCCGGGATGGCACTGTTTGTTGACTACTATCAACTCACGATGGGGCAAGCAGATTTCAAAAACCAAAACGATGCTATGATTACTGCCAATTACTATGTCCGCAAAATCCCGCAAGGTGAATATCTCATCGCAGCAGGTCTTGAGCAGGTTATCCACTTCGTACTGAATTTGCGTTTTACCGATGCCACACTCGACTGGTTAGCACAAAGTGACGAATTAGATAGAGACTACCTCGAATCGTTGAAAGATTTCCGATTTGACGGCTCTATTTATGCTGTCCTTGAAGGCACTCCTGTTTTTCCAAACGAGCCGATTATCAACGTTACCGGCAGATCCCGGGATGTTCAACTATTTGAGACATATCTGCTCTGTGTGATGAACTTTCAAACGTTGATTGCAACAAAAGCCTCACGCATTGCCCACGCAGCAAGAGGGAAACCAGTCTTTGATTTCGGTGCAAGACGTGCACATGGTAGAGATGCGGGTATCCTTGCCGCACGTGCTTCCTTTATCGGTGGTGCAAACGGCACATCGCTTGTACTTGCAGGACGTTATTTCGATATCCCCTACGTCGGTACGATGGCGCATAAATTTGTCATGGAACGTCCCACAGAGGTTGATGCCTTCCGAGATTACGCTAACGTTTTCCCACACAACACGACACTTCTAATTGATACTTACAATACGTTAGAGGGCGCAAGAAATGCGTGTATCGTTGCGCACGAGATGGAAGCGCGCGGTGCCCGTCTAAAAGCAGTGAGATTAGATAGCGGCGATCTCTTATCACTGAGTAAGGAGGTTCGCCGTATTCTTGATACAGCGGAACTTGATTATGTTCAGATTATCGCCAGCCATGACCTTGATGAATTTGAGATAGACAAATTACTTGAGAATGGCGCGCCGATTAACAGTTTCGGAGTCGGCACGCGTCTTGCGACTGGTGCTAACTTTAATTCCGTTACTGGTGAGGGCGGACCTTCCGCGCTCGGAGGTGTCTTCAAATCAGTTGAACGCGACGGGATGCCCGTTGGTAAACTGACACTTGATGAACCTGCTAAAGCCACGTTACCCGGAAGAAAGCAGATCTATCGGCATACTGATGCAAACGGAAACTATATTAAGGACAGTATCATGCTCTGGAATGAACCGCTATCTGATGGAGAACCGCTTTTAATTCCCATTGTCAAAGGCGGAGAATTGGTGTATAATTTTCCAAATTTAACAGATATTCAGGCGCGGACGAGGACGGAACTTACGAAATTGAATGAGTCTTATAAAGTTTTGACAGATGCTAAACCTTATACGGTTGAAATACATTCAGGATTGAAAACAGAATAG

Transcript

ANN33159-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P49787	Biotin carboxylase 1 OS=Bacillus subtilis (strain 168) OX=224308 GN=accC1 PE=3 SV=3
Q06862	Biotin carboxylase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=accC PE=3 SV=1
Q58626	Pyruvate carboxylase subunit A OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=pycA PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004037 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02786 all species →	CPSase_L_D2	Carbamoyl-phosphate synthase L chain, ATP binding domain	Domain	Interproscan
PF17767 all species →	NAPRTase_N	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain	Domain	Interproscan
PF17956 all species →	NAPRTase_C	Nicotinate phosphoribosyltransferase C-terminal domain	Domain	Interproscan
PF07593 all species →	UnbV_ASPIC	ASPIC and UnbV	Family	Interproscan
PF04095 all species →	NAPRTase	Nicotinate phosphoribosyltransferase (NAPRTase) family	Family	Interproscan
PF00289 all species →	Biotin_carb_N	Biotin carboxylase, N-terminal domain	Domain	Interproscan
PF13517 all species →	FG-GAP_3	FG-GAP-like repeat	Repeat	Interproscan
PF02785 all species →	Biotin_carb_C	Biotin carboxylase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005479 all species →	Domain	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	Interproscan
IPR011764 all species →	Domain	Biotin carboxylation domain	Interproscan
IPR040727 all species →	Domain	Nicotinate phosphoribosyltransferase, N-terminal domain	Interproscan
IPR051602 all species →	Family	Acetyl-CoA Carboxylase Biotin Carboxylase Component	Interproscan
IPR041619 all species →	Domain	Nicotinate phosphoribosyltransferase C-terminal domain	Interproscan
IPR036068 all species →	Homologous_superfamily	Nicotinate phosphoribosyltransferase-like, C-terminal	Interproscan
IPR016185 all species →	Homologous_superfamily	Pre-ATP-grasp domain superfamily	Interproscan
IPR011519 all species →	Domain	ASPIC/UnbV	Interproscan
IPR005482 all species →	Domain	Biotin carboxylase, C-terminal	Interproscan
IPR041525 all species →	Domain	Nicotinate/nicotinamide phosphoribosyltransferase	Interproscan
IPR011054 all species →	Homologous_superfamily	Rudiment single hybrid motif	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR006405 all species →	Family	Nicotinate phosphoribosyltransferase pncB-type	Interproscan
IPR005481 all species →	Domain	Biotin carboxylase-like, N-terminal domain	Interproscan
IPR013517 all species →	Repeat	FG-GAP repeat	Interproscan
IPR028994 all species →	Homologous_superfamily	Integrin alpha, N-terminal	Interproscan
IPR011761 all species →	Domain	ATP-grasp fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48095 all species →	PYRUVATE CARBOXYLASE SUBUNIT A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0009435 all species →	Biological Process	NAD biosynthetic process	Interproscan
GO:0004516 all species →	Molecular Function	nicotinate phosphoribosyltransferase activity	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN33159-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.