Gene detail

Detailed information of ANN33308-RA in Montipora grisea

Genomic Location: Scaffold_6585__1_contigs__length_26681:11911...23610
NR annotation: XP_011410093.1, PREDICTED: tumor necrosis factor alpha-induced protein 3-like [Amphimedon queenslandica]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN33308-RA

ATGCTTGGATTAGAATACTTACTCTCTACATGTGTATCTGGGACACACTTCTGCATTTTGCAGGAGGATCGTGCACTGGCAATCAACCCACCACAGTCCAACGAGACATGTGATGTTCTAAGCAACCTTGGTGGTGGCTCTGATGCAGACCTTACCTGCATTGTCAACGAAAACTGCAACCGAGCCTATTGCAGTCCAACCTTTTCCTCTCAAGCCTCCCTACTGAATACCTTACAGTTGAGCTTCACACTGAGACTACTACCCTGCCACCAATTTAAACTAGGCGGTGACAAGAATGCTGTGGGTGCTGTGCAGATTACCATATTTTCAGATGATAAAGAAATTGTTACAGGCACCTACAATGAATCCACTACTTATTCATTTGATGTGAGGCTGGCTACAGCACCATTTGTCCCCGTAATATCTACCAGAGTAACTGCCGATATAACCCTCAACAAAAATGACACTGCCTATGAACTCCAGAGAAAGAGCTGGTACTGTAACACCTGGACCCACTGCTACCATGACCCTGACTCCCCTTCCCTCCCCCCCTCCTCATCCCCCTCCCCAGATACATCCAATGAGACCACCTGTGAAGAACTGCAACAGATTGCCAGCGACACTGCAGGCAGTGATAGATTTTCATGTGACACTAACGAAGAATGTGATGGTCTTGTCTGTGACGTTACTATAATTGTTCCTGAACTGGGGAATGTTGCGATCAGGAGCACTGCTGATATCACTGTTCTTCCATGTGACAACCCTCCCAGTGTGTCTCTAATACTGACTGATAATAGTGGAAATGATATCGTTGAAGAAGAATCTGTGACACACAACATTTCGATAATGATTGACATCTTGGGTTTTCCAGCCATTTTTAACATAACCCTCAATCAACTGGATGGTGCAATCGGCTTACAGGCTACTGTTACAGTACTGACTCTCTCTGATGAACCCCAGCTAGTGATTGACTACATTGTAATCCCTGTCAACCCAACAGCCTGTCCTGAAGGTCTTGGAGCTGTGGCATCAAGTGGGCGCAATAGCCACGTAGAGGAGTTGATCGAAGAAGAGCTCCAGGAACGATCTGACGCGCCTCCGGTCGCAAGATCCACCGTACAAAATCGTGCAAAGAACAAACCCGCGGTGGTTAAAGTGCAAGTTCGCGCCACGCCCACCGGCGCTACTCCAAAGAGGCCTGGCCCAATGGCGCGTAGCTCCCCATACATGTATGTTCCTACATCTGGTGCAGCCCCCATCAAACCGGCTCTTCCTCGAAGCATCTCAACAACAAACCTTGACATAACCAGACGCTGTAGGGACTATGTTCAACGGGACTGGTGCACAAGTCCACCTGCTGGGGGCACCAACTTCTTCACTAGTACACACTATTCTACTCTGTCACTTCCCGCACTAGATGCCTACCCCCCTGAGTTCAAGCAGTTTGTCTTTGATCGAATTATAGATAAAGATGCCCAGCTAGCACTGGAATCTGAGAAGTGCCTCAATTGGTGTGCCTCAGCCACGAAGCTCTACCCACTATACACACTCGGTGACGGTAACTGCCTCTTCCATGCTGCTTCCCTAGGAATGTGGGGCTTCCAAGATCGTGATTTAATTCTTCGCAGGGCTGTGTCACATGCAGTCCTGTATGCAAATGACAACACATTCTATCGACGCTGGAAGCATATGCGGCAACAAGACAACCTGCAGCACAACGTTCACTTAGATGATCACCAGTGGGAGGAGGAGTGGGCTGCTGTTGTAAAGCAAGCCTCGACTGAGGTACCACCTGGAAAAGTTCTTGACAGCCTTGAAGAGTTTCATATTTTTGTCCTCGCAAACGTCCTACGTCGACCAGTGATCATGTATGCTGTTCCAAAGATGCGATCGGTCTATGGTGCCACCCTTCAACGAGTCAACTTTCATGGCCTCTACTTGCCACTCCTGTGGGATCCAAGCTCTTGTAAGAAGGATCCCTTACCCATGGCATTTTATGGTGGCCACTTCTCTTCTCTAGTAGTTATCGAGTTCCCTCATCAGTACCGAAATGGGAGCCTTGTGCTTCCACTCATGGACTTCTATAGCCAACAGCTCCCTGTCAGATTCAAGCTGTCTCAGGAAGATCCAACAGCACTTATGATGGACTACCTTAACCTGATGCAGATCTCAGACCATGGCTCTCCCTACATCTCCTCAGGGAGTATCTTATGTGCCGAACTGACCATCCACGAAAATCCTCCTACCTCAAGGGACTTATCTCGTGTTTCATTGATGCCTGCCACGATGCCTACTTCAACGATCGGTCTTATCAACAGCAACCCCGGCCACAAGTGCAAGGTGTCACTGGTGTTCCACCTCAGCATTCAACATCCAGTGGTAGAGGAGTGCCCCAGTCTCAACTCAGTAATGTGGGAAACGAGAGACAAGCGTCTGCTGTTGGGGCTGAGACTGGTAGTGGCTACAACAAATGCATCAATGGCTGTGGAAACCCATTCCCAGACCGAAATAGGCTTCTGTAATGAGTGCTATCAGAGGTACATGACACCAGATTCCAAAGGCGTCTGTCAAGTCAAAAAGGAACACCATGAACAATCCAATACACCTCCAATTGCGAGATCAGTCGTAGAGAATCGTGCAAAGGATCAAAACTGTGGTGGATACGAATGTGAGTTTGTGCTTTGCCCTCCACATTTCTTCCAAACGGAGTGTTCTATCTGTCTACAGGTGCTTCGTTCTCCCCACCTCACGAGCTGCTGTGGACATAACTTCTGCAAGGAATGTATTAGTCATCTTCAGAAGGCAGGAAAAGCTGTCCCCTCTGTAACGGTGTGGAGTTTACCCTAA

Transcript

ANN33308-RA

Protein

Uniprot

Gene family

Uniprot term	Description
Q8TE49	OTU domain-containing protein 7A OS=Homo sapiens OX=9606 GN=OTUD7A PE=1 SV=1
Q8R554	OTU domain-containing protein 7A OS=Mus musculus OX=10090 GN=Otud7a PE=1 SV=1
Q4R8W3	Tumor necrosis factor alpha-induced protein 3 OS=Macaca fascicularis OX=9541 GN=TNFAIP3 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	DUB\|OTU\|OTU

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02338	OTU	OTU-like cysteine protease	Family	Interproscan
PF13445	zf-RING_UBOX	RING-type zinc-finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003323	Domain	OTU domain	Interproscan
IPR051346	Family	OTU Domain-Containing Deubiquitinase	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR027370	Domain	Zinc finger, RING-type, eukaryotic	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13367	UBIQUITIN THIOESTERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0007010	Biological Process	cytoskeleton organization	Interproscan
GO:0016477	Biological Process	cell migration	Interproscan
GO:0030177	Biological Process	positive regulation of Wnt signaling pathway	Interproscan
GO:0035523	Biological Process	protein K29-linked deubiquitination	Interproscan
GO:0070530	Molecular Function	K63-linked polyubiquitin modification-dependent protein binding	Interproscan
GO:0071947	Biological Process	protein deubiquitination involved in ubiquitin-dependent protein catabolic process	Interproscan
GO:1990168	Biological Process	protein K33-linked deubiquitination	Interproscan