Genomic Location: Scaffold_3615__1_contigs__length_35390:27115...30539
NR annotation: KZV15346.1, Methionyl-tRNA formyltransferase [Dorcoceras hygrometricum]
| CDS | ||||
| ANN33391-RA | ||||
| Transcript |
| ANN33391-RA |
| Protein |
| ANN33391-RA |
| Uniprot term | Description |
|---|---|
| A1TWN0 | Methionyl-tRNA formyltransferase OS=Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=fmt PE=3 SV=1 |
| Q0A5C0 | Methionyl-tRNA formyltransferase OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=fmt PE=3 SV=1 |
| B4SKH6 | Methionyl-tRNA formyltransferase OS=Stenotrophomonas maltophilia (strain R551-3) OX=391008 GN=fmt PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02911 | Formyl_trans_C | Formyl transferase, C-terminal domain | Domain | Interproscan |
| PF00551 | Formyl_trans_N | Formyl transferase | Domain | Interproscan |
| PF01189 | Methyltr_RsmB-F | 16S rRNA methyltransferase RsmB/F | Family | Interproscan |
| PF01327 | Pep_deformylase | Polypeptide deformylase | Domain | Interproscan |
| PF14334 | DUF4390 | Domain of unknown function (DUF4390) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011034 | Homologous_superfamily | Formyl transferase-like, C-terminal domain superfamily | Interproscan |
| IPR023635 | Family | Peptide deformylase | Interproscan |
| IPR029063 | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR037022 | Homologous_superfamily | Formyl transferase, C-terminal domain superfamily | Interproscan |
| IPR036821 | Homologous_superfamily | Peptide deformylase superfamily | Interproscan |
| IPR018314 | Conserved_site | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site | Interproscan |
| IPR005793 | Domain | Formyl transferase, C-terminal | Interproscan |
| IPR001678 | Domain | SAM-dependent methyltransferase RsmB-F/NOP2-type domain | Interproscan |
| IPR044135 | Domain | Methionyl-tRNA formyltransferase, C-terminal domain | Interproscan |
| IPR005794 | Family | Methionyl-tRNA formyltransferase | Interproscan |
| IPR002376 | Domain | Formyl transferase, N-terminal | Interproscan |
| IPR041711 | Domain | Methionyl-tRNA formyltransferase, N-terminal domain | Interproscan |
| IPR049560 | Domain | SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core | Interproscan |
| IPR036477 | Homologous_superfamily | Formyl transferase, N-terminal domain superfamily | Interproscan |
| IPR025500 | Family | Protein of unknown function DUF4390 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11138 | METHIONYL-TRNA FORMYLTRANSFERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0042586 | Molecular Function | peptide deformylase activity | Interproscan |
| GO:0009058 | Biological Process | biosynthetic process | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0008168 | Molecular Function | methyltransferase activity | Interproscan |
| GO:0004479 | Molecular Function | methionyl-tRNA formyltransferase activity | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0071951 | Biological Process | conversion of methionyl-tRNA to N-formyl-methionyl-tRNA | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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