Gene detail

Detailed information of ANN33427-RA in Montipora grisea

Genomic Location: Scaffold_818__1_contigs__length_72131:14622...15683
NR annotation: MAG36793.1, low specificity L-threonine aldolase [Dehalococcoidia bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O07051	L-allo-threonine aldolase OS=Aeromonas jandaei OX=650 GN=ltaA PE=1 SV=1
Q8RXU4	Low-specificity L-threonine aldolase 1 OS=Arabidopsis thaliana OX=3702 GN=THA1 PE=1 SV=1
Q9FPH3	Probable low-specificity L-threonine aldolase 2 OS=Arabidopsis thaliana OX=3702 GN=THA2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003569 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01212 all species →	Beta_elim_lyase	Beta-eliminating lyase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR001597 all species →	Domain	Aromatic amino acid beta-eliminating lyase/threonine aldolase	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR023603 all species →	Family	Low specificity L-threonine aldolase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48097 all species →	L-THREONINE ALDOLASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006545 all species →	Biological Process	glycine biosynthetic process	Interproscan
GO:0006567 all species →	Biological Process	threonine catabolic process	Interproscan
GO:0008732 all species →	Molecular Function	L-allo-threonine aldolase activity	Interproscan
GO:0006520 all species →	Biological Process	amino acid metabolic process	Interproscan
GO:0016829 all species →	Molecular Function	lyase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01620	ltaE; threonine aldolase	EC:4.1.2.48	Glycine, serine and threonine metabolism	ko00260	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.