Gene detail

Detailed information of ANN33475-RA in Leptoseris scabra

Genomic Location: Scaffold_11__1_contigs__length_41608735:41457646...41461256
NR annotation: XP_029181460.2, uncharacterized protein LOC114949188 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN33475-RA

ATGGCTTTTCTTCACTCACTGCCGGCGCCTCACAGTCTGGAAATAAACGATTCCAACGTCGCCGAAAAATGGGCCGAATGGAAGGAAATGTGGGAACACTACAGCGTTGCTTCTAAAGTCAACAAAGAAGAAGGAGACGTCCAAGTAGCTGCATTTTTCACTGCGATTGGAATGGAAGCAGGGAAAGTATTCAAAACTTGGAATCTAACGGCTACCCAAAAGAAGGATATCAAAGGTGTTTTAGAGCGATTCGAGAACTATTGTAATCCTAGAAAGAATATTCCATTCGAGCGCTATCGCTTCAACTCGCGTCAACAAGAGTCTGGCGAGTCATTTGACCGTTATGTGACTGCTCTTCGTCAGATCGCAGATAAGTGTGCCTTTGATGTTATTACACCCGATGACATCCTTAGAGACAGGATTATATTTGGCATCACTGACACTAAAGTCAGAGAAAGGCGTGAACCCGAACTCAGTCTCGCAAAGACGCTGGCTTTTTGTCGCGCATCAGAGATCTCTCAAGCACAGATTAAGGAGGTGAGCGAGCTCAACGCACCCAACATTCATCTATTCAAGGACAACGAGAAGTCTGCCGAAGAGAAGTCTCCTGATAAACTGCCTCCCGTAAATCAACTTCGCTACCCTTGCAGATGTTGCGGGAGAAAACACGAGAGTAAGCGCGAGGCTTGCCCTGCGTGGGGCAAAAAGTGCATAAAGTGCGGAAGAGAGAACCACTTTGCTAAGAAATGCCCTACTTCTTCTGCCTCAAAGAGAGTGTCACTGGTCGAGGAGGACGATGAGCTCCCAGTTTTTCAAGTGTCCAAGGTGTCAGCCCAGAGTTGTGAATCGAACCTGGTGACGCTGAAGGTCTCAAGTGGAAACTTCATACGGTTTGAGATTGATACCGGAGCGCGTTGTAACGTCTTACCTGTGCACATTTACAAGAAGGCAACCGGTGATTTTGACCTCAAGCAGGTTAACCCAGCAAAGTCGTCCATTGTATCGTATGATAGTGGAAATATTCCGGTGTCAGGAACTGTGAAGATCCAAGTTTGGAGAGGATCATTCACATGTCTGTTGCTGTGTCGTCTCGTGGAAAGCAAACGCTGTCGTGCCATTTTGGGCAAATCGGCCTGTGAAGGAATGGGTGTGGTTGAAATTAAGGATTCTGACGCTATTCGTCGGCCTGATACTAGTGGCGGTCAAGTTTTTTCTGTCCAAGACGTGATGTCTAGCTCCAGGCCACCTTCCAAGGAGCAGGTCATGGAGATGTTTCTCGATGTTTTCGACGAAGGCCTTGGTCTGCTCGAGGGCGAGTACCACATCCGACTTAGCGATTCAGCAAGGCCAATTCAACACGCTCCCCGTCGAGGAGAGCCCCGTGATGTGGAAGCAAGTCTTCAGTGGAATCCCGATAGCATCCCGCAGGTATCACCTAATACCGGTGCCTCGCCAACATGCAAGCCGGTGAATAACATTTTGTTTCTTAAGACACATAAGACAGGATCAAGTACGTTGACTAATATATTAAACCGCTATGGTGATAGTAGAGATCTGTTCTTTGCGTTGCCTGTCAGTGGAATGGCTACTTTTCACTGGCCTGATCCATTTTTACTTAAATCTACAATATCAATAAAAAGAGCTCCGAATATTCTTTCAAACCACGCCAGATTCAACAAGGGCCCGATGCACTGGCTTTTTCCAAAGGAGACAACACACTACATCACAATACTCCGGGAACCAGCTGAACAATTTGAATCTGTTTTCAACTATTTTGATGTTGCTAAGAAATTAGGAGTGCCAGGAAATGTTACGTCACCACTGAAGAATTTTCTTCAAAACCCCGCATTTTATTTAAACAAAGGAAAACGAGAGTTTCATTTGCTCAAAAACCCATCGTTATTCGATCTTGGATTTCAGATGTTATATCACAAGAACTTTACTGCTGTGGAAAACTACATCCACTTTCTTCAACATGAATTCGACCTTGTAATGCTCATGGAATACTTCGATGAGTCGCTTGTGCTCCTAAAAAGACGTTTTTGTTGGAAAGTCGAAGACATTTTGTATTTCAAACTTAATGAAAGGACAGACAAAGAAAAACAGAATATTACAAGTAACACAAAGGAGTTGATTCGAAAATGGAATTCGGCAGATGTCTTATTGTACAATGTTTTCAATCAAACGCTGTGGAAAATGATACAACAGGAAGGCCCAGACTTTTTGGAAGATCTGACACTCTTCCGAAAGGAAAAGCAATCCATGGAGGAAAAATGTTTACAAGAAGGAAATTTCTTGACCAATCCATCCGGCAGAAAGCTAGTTAAGGGTTATGCAGTCAAACAAAATATCTCCAAAGAACTGAAGGAAACCTGCAGCAAAATGATCATGAATGAAATTCCGCATCTAAATTATCTTCGCCAAAAAATGATCGAACAGCAAGAAGCTGTTGACATTGCTGTGCACTAA

Transcript

ANN33475-RA

Protein

Uniprot

Uniprot term	Description
Q9JHE4	Galactosylceramide sulfotransferase OS=Mus musculus OX=10090 GN=Gal3st1 PE=1 SV=2
Q99999	Galactosylceramide sulfotransferase OS=Homo sapiens OX=9606 GN=GAL3ST1 PE=1 SV=1
A6QNK1	Galactosylceramide sulfotransferase OS=Bos taurus OX=9913 GN=GAL3ST1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06990	Gal-3-0_sulfotr	Galactose-3-O-sulfotransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR009729	Family	Galactose-3-O-sulfotransferase	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14647	GALACTOSE-3-O-SULFOTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001733	Molecular Function	galactosylceramide sulfotransferase activity	Interproscan
GO:0009247	Biological Process	glycolipid biosynthetic process	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0008146	Molecular Function	sulfotransferase activity	Interproscan