Gene detail

Detailed information of ANN33509-RA in Montipora grisea

Genomic Location: Scaffold_2435__1_contigs__length_42790:29751...32278
NR annotation: NOQ44625.1, ribulose-phosphate 3-epimerase [Nitrosopumilus sp.]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN33509-RA

ATGGGGCTCAACTATTACAAGATTAAAAAGAATGTTTTGCGAGCCCGAAGACTAGTAATCCGGGCTACGACTGCTGCCGGCTCAGGACATCCTGGAGGATCGTTCTCTATGGCAGAGATAATGGGATGTCTGTTCCACAAGCATCTCAGATACGATCCAGACAACCCGCAATGGGAGGACCGCGACAGGCTGGTTTTGTCAAAAGGGCATGCCGCACCTGGACTCTTTGCAAATCTTGCGGTGGCCGGATACTTTGACGAGTCCGAGCTTGACGGCCTGCGAAGCCTTGGAAGCCGACTGCAGGGACACCCTGATCTCAAGTGTTCCGGTGTCGAGTTCTGCGGAGGATCGCTTGGAATGGGACTCTCGTTTTCCATAGGTGTGGCGCTTGCGGCCAAGCTTGACGGACGCGGCCACCACGTCTATGCGGTGATAGGCGACGGCGAGAGCAACGAGGGACAGGTGTGGGAGGCCGCCATGACAGCCTCCAAGTATAACGTAGACAATCTGACTGCCATCCTGGACCGGAACTTTATCCAGCAGGACTCGTACACCGAAGAGGTCATGCCGCTTGACGGAAGTGGCGAGTCGCATACCCGGACAGCCGAAAAGTGGCGATCGTTTGGATGGAACGTCATAGAGGCCGACGGCCACAGGATAGAGCAGCTGGACGGGGCGCTGACGTGCGCCCGTGCAACCAAGAACGTACCCACCATAATTATCGCCCGTACCATAAAGGGCAAGTCAGTCGAACACATGGAGGACAATCCTGCATGGCACGGCAAGGCGGCAAGCCGCGATGTGGTGCCCGTCATATACGACGAGCTGGCCGCACACTTTGTGATAGCTCCCTCCATCACGGCCGGCGACATGGGAGATCTGGCAGGCGAGGTGACGCGATGCGTCGACGGACGGGCGGACTATATCCATATTGATGTGATGGACGGCAGGTTTGTGCCGGCCCGCACATTTGATCACGAAAAGATACGCGAGCTGCGTCCCCTGACGGACACGCCGTTTGATACGCATCTGATGATTGAAGAGCCGGCAAGACACGTGCGTGACTATGTGGATGCCGGAAGCGACATAATCACGGTGCACGCCGAGGTTTGCGACGAGTCGTCATTCGGCGAGATCCATGACATGCTGAGGCACAGCGGAGTCGGAGTCGGAATTGCGATAAATCCCGATACCGATCTGCCCGCGTGGTCGTTGGACTTTCTGCCCACCACCGATCAAATCATCGTCATGTCTGTGGTTCCCGGCATGTCCGGACAGAGATACATCATGTCGACACACGACAAAATGTCCTCATTGGTGCCCCTGCTTGCAGAGCACGGATTCGCGGGAACCATAGAGGCCGACGGCGGCATCAATCCTGACAATGCCGGATCGTGCTTTACGGACGGCGCCAGGGCGTTTGTGGGCGGCAGCGCAATCATGGGGCAGCCGGATGCGGCAGCCGCAATCAGAATGCACAAAGAAGGAGCAGATATCCAGGCTTGCCTCGGAGGCGGGTTATCTGTGAAGTCTGACATGCGCACCGAGTACGGCAGGGCGCTGGTCAGACTGGGCGCCGAGTACCCCGGGATGGTGGTGCTGGGAGCCGACACGACGGGCTCGCTCAAGACCGCCGAATTTGGAAGGACATTTCCAGACCGCTTTTTCAACGTGGGTATCGCCGAGGCGAACATGGTCTCGGTAGCCGCAGGCATGGCAATCTCGGGCAAGACGCCGTTTGCAAGCACGTATGCGATATTCCTGCCGGGCAGGGCAGTAGATCAAATAAGAAACTCTGTGGCATATCCGTCACGTAACGGCAGGGACGGCCTCAACGTAAAGCTCGTAGTCTCTCACGGCGGCCTCTCGGTGGGTGCCGACGGCGGCTCACACCAGCAGATCGAGGATATCGCGATAATGCGTGCGATCCCCAACATGCGCGTGCTGATACCCGCAGACGGGACGGCCGTGTCGGAGCTGACAGAGGTCATGGCCCGCGAATACGGACCTTTCTACATGAGGATGTCGAGATCCGCCACTCCGACGATATATGCCAAAGCGGGAGGGTTTGAGGTGGGCAGGGCAGTCACCCTGCGTGACGGCAGTGACTGTACGATTGCCGCATGCGGGATTACAGTCGGCATGGCGCTAGAGGCCGCACAGATATTGAGCCGTGAGGGGATCTCTGCCAGGGTGCTTGACATGTTTTCCGTCAAGCCGATGGATAGCAACACCCTGGAAAAGGCCGCAAGGGAGACAGGCAGGATTATCACATGTGAGGAACACAACGTGATGGGAGGCATGGGATCGGCCGTAGCCGAGATTGTGTCGGAGAAACATCCGGTAACCGTCAGACGCATCGGTGTGCAGGACGTGTTCGGCGAGTCCGCACGCGACAGCGAAGATAGATCGGCTGCTTGA

Transcript

ANN33509-RA

Protein

Uniprot

Uniprot term	Description
Q58092	Putative transketolase C-terminal section OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0679 PE=5 SV=1
Q58094	Putative transketolase N-terminal section OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0681 PE=5 SV=1
J0MXK0	6-deoxy-6-sulfo-D-fructose transketolase subunit SqwG OS=Clostridium sp. (strain MSTE9) OX=1105031 GN=sqwG PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02779	Transket_pyr	Transketolase, pyrimidine binding domain	Domain	Interproscan
PF00834	Ribul_P_3_epim	Ribulose-phosphate 3 epimerase family	Domain	Interproscan
PF02780	Transketolase_C	Transketolase, C-terminal domain	Domain	Interproscan
PF00456	Transketolase_N	Transketolase, thiamine diphosphate binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR005475	Domain	Transketolase-like, pyrimidine-binding domain	Interproscan
IPR029061	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan
IPR011060	Homologous_superfamily	Ribulose-phosphate binding barrel	Interproscan
IPR005474	Domain	Transketolase, N-terminal	Interproscan
IPR000056	Family	Ribulose-phosphate 3-epimerase-like	Interproscan
IPR033248	Domain	Transketolase, C-terminal domain	Interproscan
IPR009014	Homologous_superfamily	Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II	Interproscan
IPR051424	Family	Transketolase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43195	TRANSKETOLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0016857	Molecular Function	racemase and epimerase activity, acting on carbohydrates and derivatives	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004802	Molecular Function	transketolase activity	Interproscan
GO:0030976	Molecular Function	thiamine pyrophosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00615	E2.2.1.1, tktA, tktB; transketolase	EC:2.2.1.1	Biosynthesis of ansamycins	ko01051	deepkoala