Gene detail

Detailed information of ANN33603-RA in Montipora grisea

Genomic Location: Scaffold_1220__1_contigs__length_59317:46624...48771
NR annotation: XP_003386522.1, PREDICTED: DNA demethylase ALKBH1-like isoform X1 [Amphimedon queenslandica]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P0CB42	Nucleic acid dioxygenase ALKBH1 OS=Mus musculus OX=10090 GN=Alkbh1 PE=1 SV=1
Q13686	Nucleic acid dioxygenase ALKBH1 OS=Homo sapiens OX=9606 GN=ALKBH1 PE=1 SV=2
Q9SA98	DNA N(6)-methyladenine demethylase ALKBH1A OS=Arabidopsis thaliana OX=3702 GN=ALKBH1A PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13532	2OG-FeII_Oxy_2	2OG-Fe(II) oxygenase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004574	Family	Alkylated DNA repair protein AlkB	Interproscan
IPR027450	Domain	Alpha-ketoglutarate-dependent dioxygenase AlkB-like	Interproscan
IPR037151	Homologous_superfamily	Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily	Interproscan
IPR005123	Domain	Oxoglutarate/iron-dependent dioxygenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16557	ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0008198	Molecular Function	ferrous iron binding	Interproscan
GO:0035513	Biological Process	oxidative RNA demethylation	Interproscan
GO:0035515	Molecular Function	oxidative RNA demethylase activity	Interproscan
GO:0035516	Molecular Function	broad specificity oxidative DNA demethylase activity	Interproscan
GO:0035552	Biological Process	obsolete oxidative single-stranded DNA demethylation	Interproscan