Gene detail

Detailed information of ANN33662-RA in Montipora grisea

Genomic Location: Scaffold_6869__1_contigs__length_26115:4817...6955
NR annotation: OHD68214.1, ATP-dependent DNA helicase RecG [Spirochaetes bacterium RBG_13_68_11]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN33662-RA

ATGAGGGCGACGCCGAAGCCGGCCGGACTCGGCTCGGCCGGCGCTGAGCGCGCCGCGCGCCCCATCCGACCTCTCGCCTGGGACGACGACGTAGCGGCGTTCCGGGGGGTCGGCGCCGCCACGCGGGAACGCTTGGCGCGGCTCGGCGTGCACACGGTCGGCGACCTGCTGATCCACTTGCCGCGCAGCTACCATGACCGTCGCCATCCGCTGCCGCTGGCGCAGGTTCCCGCCGGCAGCGACGCCTGCGTGAGCGTCACCGTGGTGCGTATCGGATCGTTTCGGTTCCGCGGCCGCGCGACCCCCGCGATCACGATCGCCGACGCCGCAGGCGACATGGCGACACTGTATGCGTTCGGCCGACCGCAGCTCGGCCGCATACTGCGGCCCGGTCAGCACCTGCTGGTCTACGGACGGTTCGATCGTCGTGACGGCCGGATGTCGGCCGGCCGTTTCGAGATCGTAAACCCGGAAGAGGCGGCCGGAGGGCTCGTGGCGGTGTATCCGGCCACCGCCGGACTCACGCAACGAACGCTCCGCCGCATGATCGACGCTGCCCTGACGGCCGGCGGATCGTCCGCCCGATTTCGGCTCCCGGCGGAGGTGGCGGCCGCCCGTCGATTGCCGGCAAAGGCTCAGGCGCTGGCCTGCGTGCACCGGCCGGCAAGCCTCGAGGCGGCGGAAGGAGCGCGGCGGGCGCTGGCGTACGAGGAGCTGTTCCATCTGCAACTGGAGCTGGCGCGCCGCTCGCCGGCCGGCCGCCCACGACCGGAACCCCGGCGACGCGGCGAGCGGCTGCAGGCGGCGATGCTGGCCCGGCTGCCGTTCACACTGACCGGAGCGCAGCGTGCCGCGTTGGCCGAGCTCGAAGGGCACCTGTACGGCCCGCGCACGACCGCCACGCTGCTGCAGGGAGACGTAGGCTGTGGCAAGACGCTGGTGGCGCTGCTGGCTGCGGCGGGGGTAGTGGACTCCGGGCAGCAGGTAGCGATAGTCGTCCCGTCGGAAGCGCTCTGCTTCCAGCACGCGGAAACCGCCTCGAGCCTCATGGAGCCGCTGGGAGTGCGGCTGGGGCTGCTGTCAGGCAGCACCGACCACGCCGCACGCGATCATCTGCTGCCGGCGCTGGAAGCAGGGACCGTCGACGTCCTGCTGAGCACGCACGCGGTGCTCTCGGAGCCAGTCCGATTCGCCGACCTGGGATTGGTGGTGATCGACGAGCAGCACAAGTTCGGCGTTGCCCAGCGGGCCGCGGTCGCAGCCAAAGCGCCTGCCGGTGACTTGATCCTGATGACCGCCACGCCGATTCCGCGAACCCTGGCGCTTACCTTCTACGGAGACATGACGTTGAGTTCCATCGACGAGCAGCCGGCCGGTCGGCCGCGGCTGCGCACCCATCTGGTGCGGCATCAGCACCGGGAGCGGGTCTGTCGACACGTCGAGACCGAACTGGCGGCCGGCCGCCAAGCGTACTTCGTCTGTCCGTCGATCGGCGGTGTCGACACGGTGAGCGACGGTACCGGCGATCTGTTCGCCGACTCGTATCATGACCACAGGGCGGTAACCGCGCCGAAGCGGGGTGAGGCGACATCTGCCCGAGCGCTGTTCGAGTGGCTGCAACGTCGCTATGCCGGTTTCCGAGTGGGTCTCGCGCATGGCGGCATGGCTGCAGCCGAGCAGCGCGAGACCCTGAGTGCGTTTCATGACGGCTGCATCGACGTGCTGGTGGCGACCACCGTGGTCGAGGTGGGACTTGACGTGCCGAACGCCACCTGCATGGTGGTCGAACATGCAGAGCGCTTCGGCCTCGCGGCGCTTCATCAGTTGCGCGGCCGCGTGGGCCGTGGGACCGACCCTTCGTACGCGTTCTTTCTCTACGGTGACGAGCTCACCGCGCAAGCGATCGAGCGGTTGCGCGTCCTCAAGCAGCACGCCGACGGGTTCGCGCTGGCGGACTTGGACTTGGCGTTGCGTGGACCGGGCGAACTCGCCGGCACACGCCAGTCGGGAATGCCGCCGTTGCGCGTCGCGCGCTTGGCCGCGGACATGGACCTGATGCGGCAGGCGCAGGAGGATGTCCGTCGTTACCACCGCGGTGGCCACGACGTACCGGCCGACGGTGAGCGGGCATGCGGATAA

Transcript

ANN33662-RA

Protein

Uniprot

Uniprot term	Description
P96130	ATP-dependent DNA helicase RecG OS=Treponema pallidum (strain Nichols) OX=243276 GN=recG PE=3 SV=1
Q8XD86	ATP-dependent DNA helicase RecG OS=Escherichia coli O157:H7 OX=83334 GN=recG PE=3 SV=1
P24230	ATP-dependent DNA helicase RecG OS=Escherichia coli (strain K12) OX=83333 GN=recG PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF19833	RecG_dom3_C	ATP-dependent DNA helicase RecG, domain 3, C-terminal	Domain	Interproscan
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF17191	RecG_wedge	RecG wedge domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR047112	Family	ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR045562	Domain	ATP-dependent DNA helicase RecG, domain 3, C-terminal	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR033454	Domain	RecG, wedge domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47964	ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTIC	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003678	Molecular Function	DNA helicase activity	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03655	recG; ATP-dependent DNA helicase RecG	EC:5.6.2.4	DNA repair and recombination proteins	ko03400	deepkoala