Gene detail

Detailed information of ANN33749-RA in Montipora grisea

Genomic Location: Scaffold_1384__1_contigs__length_56057:24377...26107
NR annotation: EEE38893.1, lipoic acid synthetase [Rhodobacteraceae bacterium KLH11]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q1GGW2	Lipoyl synthase OS=Ruegeria sp. (strain TM1040) OX=292414 GN=lipA PE=3 SV=2
A3PJL9	Lipoyl synthase OS=Cereibacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) OX=349101 GN=lipA PE=3 SV=1
Q3J2P4	Lipoyl synthase OS=Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) OX=272943 GN=lipA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16881	LIAS_N	N-terminal domain of lipoyl synthase of Radical_SAM family	Family	Interproscan
PF04055	Radical_SAM	Radical SAM superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR003698	Family	Lipoyl synthase	Interproscan
IPR007197	Domain	Radical SAM	Interproscan
IPR006638	Domain	Elp3/MiaA/NifB-like, radical SAM core domain	Interproscan
IPR031691	Domain	Lipoyl synthase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10949	LIPOYL SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009107	Biological Process	lipoate biosynthetic process	Interproscan
GO:0016992	Molecular Function	lipoate synthase activity	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03644	lipA, LIAS, LIP1, LIP5; lipoyl synthase	EC:2.8.1.8	Lipoic acid metabolism	ko00785	deepkoala