Genomic Location: Scaffold_2545__1_contigs__length_41948:15634...17310
NR annotation: WP_123327318.1, tryptophan--tRNA ligase [Alteromonas oceani]
| CDS | ||||
| ANN33814-RA | ||||
| Transcript |
| ANN33814-RA |
| Protein |
| ANN33814-RA |
| Uniprot term | Description |
|---|---|
| Q8EK12 | Tryptophan--tRNA ligase OS=Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1) OX=211586 GN=trpS PE=3 SV=1 |
| Q9EYY6 | Tryptophan--tRNA ligase OS=Klebsiella aerogenes OX=548 GN=trpS PE=3 SV=1 |
| P57956 | Tryptophan--tRNA ligase OS=Pasteurella multocida (strain Pm70) OX=272843 GN=trpS PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00117 | GATase | Glutamine amidotransferase class-I | Domain | Interproscan |
| PF00579 | tRNA-synt_1b | tRNA synthetases class I (W and Y) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050203 | Family | Tryptophan--tRNA ligase | Interproscan |
| IPR017926 | Domain | Glutamine amidotransferase | Interproscan |
| IPR029062 | Homologous_superfamily | Class I glutamine amidotransferase-like | Interproscan |
| IPR024109 | Family | Tryptophan-tRNA ligase, bacterial-type | Interproscan |
| IPR006221 | Domain | Anthranilate synthase/para-aminobenzoate synthase like domain | Interproscan |
| IPR002306 | Family | Tryptophan-tRNA ligase | Interproscan |
| IPR014729 | Homologous_superfamily | Rossmann-like alpha/beta/alpha sandwich fold | Interproscan |
| IPR002305 | Family | Aminoacyl-tRNA synthetase, class Ic | Interproscan |
| IPR001412 | Conserved_site | Aminoacyl-tRNA synthetase, class I, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43766 | TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004830 | Molecular Function | tryptophan-tRNA ligase activity | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0006436 | Biological Process | tryptophanyl-tRNA aminoacylation | Interproscan |
| GO:0000166 | Molecular Function | nucleotide binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0004812 | Molecular Function | aminoacyl-tRNA ligase activity | Interproscan |
| GO:0006418 | Biological Process | tRNA aminoacylation for protein translation | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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