Gene detail

Detailed information of ANN33937-RA in Leptoseris scabra

Genomic Location: Scaffold_16__1_contigs__length_5761142:1169626...1175585
NR annotation: KAJ7390969.1, Activating transcription factor 7-interacting protein 1 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN33937-RA

ATGTTTGCTTTTTCGCTGTTTTTAGGATCCAAAACTAATCAGCCGCGGCCTATGACGCTAGGAGAACGCAAACGAAATGGTCCCCGAGTACTGGTAAACAGACTAAATATAAATCAAGACGTCATCGAGAGATTGCGCCGGATTACAAAAGTATGTGGAAAGCCGGTTGCTCCTGACAAAGCAAAGAACGAAAGCACCGAAGCAAGTAAAGTTAATGGAGTGATGGGTACAGGAAAACAAAAGGAAGTAGTGAATGGGTCTTGCAACAGTGATGACAAAAACAAAAGGATAACTGAAGAGAATGGAATCAAGGAAGCAGGAGATAAAGATTCCAAACAGACTTTGACTCCGATTCAAAATGACACAAAAGAAGTAAAGACGTCATCTTTTGAGAATGCCAAACCCCAAGACGGCGATGAGGAAATAAACAAGCAAACAGCTGCAGATGTGCAGACCTTTAAAGAGGTGCTGAAAGAGATCATCGAGCAACGTACCAAGATGGTTGAAGAAGCTGTGGCAGCCAATTCAATACATCTTCAGAATCGTATACGAGATTTAGAAAGAGAGAACAGGGAACTGCAGTGGAATGCAAGAAAGCTGTTTGGCAATTTTAAAAAATCTATAGCAGCGCTTGAAAAGAAGAAGGTCTCGAAGACATCCCGTGGCATCCAAGTTGAAAATGACCTGAGCCTTGGAAGCGGAGTTCCTGGCAGTCCAGTTATACCAGTACCTCATCCAAAGCCTTTTGTGGTGATGACGACTGCTGGAGAGACGATTGGTGCCAAAGAACCTTTATTGATATCCTCTTCCAGCTCTAATACAACAAACGTTGCCACCCCAAGATTCAATCATGTTGCACTAAAAACAAGTCTTCAACAATCGTATCATCCGCTGCAAACGACTGGGTCGGCAGCAGCTACAACTGCTGTAGTACTCTCAGTAAACCCTAGGCCTGTACACGTTACAACTGGGTCGACAGCAGCTACAACTGCCGTGGTATTCTCAGTAAATCCTAGACCTGTACAAGTTACAGTGAATCAAAAGGAAAGTAATGAGCCAGAAAGTGAAACCAGGTCTTCACAAATAAGAACTGCGCAGTTGTCAAAACCGTTACTACAAAAGACGCTTGATCAATCTCAACCAGCTGAGCAGACAAAATCGTCCACCGGGGTTGCATTACAAACTCAGTTGCCTTCTCAAACAAACTCATCCTTGGAGAGGATACGTCAAAACCAGGAAAAGTTACTACAACAGAGGCGGCTTCTTCAGGAGCGACAGCAGCAACAGCAGCTGCAACGTATTCCTAAATCATCGACTCCACCAGTACCGCGTCTGCAAACTCCAACTGAGACAACAGTGTCTCTCTTACAGCAATTACAACTGCGGCAACAAATTCAGCAACAGCAACACTATCAGCGAGTGGTAAATCAGCAGCAAAAACCACAAGAACCTCAAATTTCCGGGCCATCAAGTCAAGCGAGACAAGATCAGGTCTTAACATCGGGGCCACGACAAACAGACCCTTCTTCTGCGCAAAAACAGCAGTTGCAGAAAAACTCTCGTAGTTTCGTACCGTCAAGTCAAGTTTACACCTCACAGCAAAGAACCCGTTCATCAAGTGCCTCTCAAAATCCTACGTTCTCGTTAGGACAACTGACACTGTCCCATTCACAACAAAACGCAACGTCAAATCCAGCTCCTTCTTTGGCGAGTTCCAATGCAAGAAGCCTCGGTAACATTCCTAGGCTTCACGGAACAACGTTTGTTAACTCAGCTGGTAAAAGTCAAAATTCTGCCTTGCCTCCATCTATCACCCCTCAACAAGGATCTCTCGGTAACGTTAGAAATGCACGATCAAACTCTCTAATCCATGAACACATAAATAACCTTACGGGTCATTCCCGCAATAATCAGCTGTCATCATCCGTTCCAGCAACGAATGGCGGACAACAAAGTGAAATCTCAAAAAGGCAAGAGACAGTTTCTACCGTGAACGTGACTGCAAATGGTAGCTACCGTGGGGAATCTGACTTCCCATCTGAACATTCTCGACAGCTTCAAAATCCCGCTAGTATTCAAAACCACATGACAACTGATCGAGAAGGTTCTTTGGTGCCTAAAGAAGTGCCCACTAGTGCGGCATCAAACAATAAACAACCTCAACCGGATGCCCAAAGCAGTCGACAGAGCATTTTGGTAACCGCTCGAAAAAAGCATATAGATGAGGACGTTCTACCATCTGGGTACAGATTTTCATTGCCTTCACCTGAGTATTTGCTTCATCGACAAAGATTGCAACAACAACAACAACAACTGCAATCTCGAAATCAATCTCCCAATCCACAAACCAGCCAGGGATCCCAAACTCAGTCCCTTCAGAGCGCTATCTCGACTGATGGAGTGCCTCTTTCAGGAGGACTTCGGCGTGAGCCAGCGAGAGTAGTATATACGAGGCAGCCCTCTTCCACGGAAATGCAGACCATACCGATGAAAACAGTACAGCAAGAGGCGGGTCTTAATCAAACTTCCCGCAATGAAGGCGTCCCTCAATCCGGGTATCGACCGATTCGACCGTCGCCAGAGCAATGGTTACAGCAGAAGAACCACCAAGAACGAGAGTTTCAACCTCGTAGGCAACCCCAACCGGCTCGTGCAATTCAGGAGCAGCAACAATCGCTCCAAAGCCAGCAGCGCGTGAATGCGAGTGAGATTGGAAATCAACGCATTACTCTACAGTCGCTTTACAGACCACCTATTCAATCTCCTGGAATCTCTTCGAGCGCTCCTCCAAATGACAAACACCCTCGAGATGCACAAAGAACAAGTGTTCCACACTCGGCCACACTTAGCCATCCGTCCAACACAAATCCGTTAGCGGTAAACCAAACAAATTTGCAGAAACCACTCCCTAAACCTTCAGCTTCTATTGCCGTAATGAGCAGTGGCATTGTCCTTTCCTGGAACATGGAGTATGACGAAGCATCGATCAAAATCGATAATTATGAACTCTTTGCGTGTCAGGATGTTACCGAAACAAATGGACAGCCCATCAAATGGAAGAAGATTGGTATTGTAAAAGCCCTTCCCCTCCCTATGGCTTGCACGTTGACGCAGTTCTCCACCGGAAGCAAGTATTTCTTCTCAGTTCGTGCGGTAGATGAAACAGAGCGAGCTGGTCCCTTTAGTGATCCGTGTACGGTTGCACTGAATTCTTAA

Transcript

ANN33937-RA

Protein

Uniprot

Uniprot term	Description
Q5ZIE8	Activating transcription factor 7-interacting protein 1 OS=Gallus gallus OX=9031 GN=ATF7IP PE=2 SV=1
Q6VMQ6	Activating transcription factor 7-interacting protein 1 OS=Homo sapiens OX=9606 GN=ATF7IP PE=1 SV=3
Q7TT18	Activating transcription factor 7-interacting protein 1 OS=Mus musculus OX=10090 GN=Atf7ip PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16794	fn3_4	Fibronectin-III type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR026085	Family	Activating transcription factor 7-interacting protein	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23210	ACTIVATING TRANSCRIPTION FACTOR 7 INTERACTING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003712	Molecular Function	transcription coregulator activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005667	Cellular Component	transcription regulator complex	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0090309	Biological Process	obsolete positive regulation of DNA methylation-dependent heterochromatin formation	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25802	ATF7IP, MCAF; activating transcription factor 7-interacting protein	-	Chromosome and associated proteins	ko03036	deepkoala