Detailed information of ANN33980-RA in Montipora grisea

Genomic Location: Scaffold_791__1_contigs__length_73401:52038...53951
NR annotation: MCE2486513.1, GIY-YIG nuclease family protein [Desulfurellaceae bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P9WLJ0Putative bifunctional exonuclease/endonuclease protein MT2247 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2247 PE=4 SV=1
P9WLJ1Putative bifunctional exonuclease/endonuclease protein Rv2191 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2191 PE=1 SV=1
A7FYX4UvrABC system protein C OS=Clostridium botulinum (strain ATCC 19397 / Type A) OX=441770 GN=uvrC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009139 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00929
all species →		RNase_TExonucleaseFamilyInterproscan
PF01541
all species →		GIY-YIGGIY-YIG catalytic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050066
all species →		FamilyUvrABC system protein CInterproscan
IPR013520
all species →		DomainExonuclease, RNase T/DNA polymerase IIIInterproscan
IPR047296
all species →		DomainUvrC/Cho-like, GIY-YIG domainInterproscan
IPR000305
all species →		DomainGIY-YIG endonucleaseInterproscan
IPR035901
all species →		Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR006054
all species →		DomainDNA polymerase III epsilon subunit, exonuclease domainInterproscan
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30562
all species →		UVRC/OXIDOREDUCTASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006974
all species →		Biological ProcessDNA damage responseInterproscan
GO:0009380
all species →		Cellular Componentexcinuclease repair complexInterproscan
GO:0006289
all species →		Biological Processnucleotide-excision repairInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003887
all species →		Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006260
all species →		Biological ProcessDNA replicationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN33980-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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