Gene detail

Detailed information of ANN34040-RA in Montipora grisea

Genomic Location: Scaffold_8808__1_contigs__length_21538:598...3276
NR annotation: WP_166999855.1, ATP-dependent zinc metalloprotease FtsH [Pseudomaricurvus alkylphenolicus]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN34040-RA

ATGAGTAAATCAAAGAGTAGTCGTCGATGGCTAGACGAGCACTTCAATGACCAATTCGTCAAGCAGTCGCAACAAGATGGCTTTAGGTCGCGAGCCAGTTATAAGTTGTTGGAAATCAATAACAAGGACCATTTGATCAAGCCGGGTGATACTGTGCTGGATCTAGGAGCTGCGCCGGGTGGCTGGAGTCAGGTGGCTGCTCGAATTGTGGGCGATCATGGCCGCGTTATCGCCTCAGACATACTACCTATGGATTCGCTGGCCAATGTCGAATTCGTTCAAGGGGATTTCACTGAGCCTGAGCCTTTTGAGACTATTTTAGAATTACTGGGAGATTTGAAGGCAGACGTTGTAATTTCCGATATGGCCCCCAATATGAGTGGTATGTCAGATATTGATCAGCCAAAAGCGATGTATTTGGTTGAATTAGCTTTGGAAATGGCGACTGAATGTTTGAGACCTAACGGAAATTACGTGGTTAAGGTCTTTCAGGGCGAGGGTTTTGACGCTTATTTGAGAGAAATGAAGCAAAGGTTCTCTAAGGTAGTGACGCGGAAACCCGATTCTTCCAGCAATAGGGGGCGTTACTGTAATCGTGGTTGTGAGGGTGTTCATTTGAACGATATGGCGAAAAATCTCATTCTGTGGCTGGTCATCGCGGCGGTTCTGTTAGCGGTGTTTCAGAATTTTAATCATCAAGCGCCTCAGGATACATTGACCTACAGTGAGTTTGTCGACGAAGTTCAAAGGGATGAAATTCGCGAAGTGATGGTAGATGGTTTGATTATCATCGGCACCAGGCAAGATGGAACTCGCTTTGAAACCGTAAGGCCTCAGATCGCAGATGACAAACTGATGGAAGATCTGCTTAACCACAGTGTGGTCGTTAGGGGACAAAAGCCAGAGCAGCCAAGTCTGTGGCAGCAGCTATTGGTCGCGAGCTTTCCGATATTGCTGATTATTGTTGTCTTCATGTTTTTTATGCGGCAAATGCAAGGCGGCACGGGCGGCAAGGGTGGCCCAATGAGTTTTGGTAAGAGCAAAGCCAGATTGCTTGGAGAAGATCAGATCAAAACTACATTTGCTGATGTGGCTGGTGTCGACGAGGCAAAAGAAGAAGTGCAAGAGCTGGTGGAGTATCTGCGTGATCCTTCTCGGTTCCAACGTCTGGGAGGAAAAATTCCTCGTGGTGTGTTGATGGCGGGTCCTCCCGGTACGGGTAAGACTCTGCTGGCTAAGGCGATCGCCGGCGAAGCTAAAGTGCCTTTTTTCTCGATTTCTGGTTCCGACTTCGTTGAAATGTTTGTTGGTGTTGGCGCGTCGCGTGTTCGAGATATGTTTGATCAAGCCAAAAAGCAGGCGCCTTGCATCATCTTTATTGACGAAATCGATGCCGTGGGCCGTCATCGTGGTGGTGGTCACGGTGGTGGTCACGATGAAAGAGAGCAGACCCTTAACCAGCTGCTGGTCGAGATGGACGGCTTCGAAGGCAATGAAGGTATTATCGTCATTGCAGCCACGAACCGCCCTGACGTGCTCGATAAAGCATTGTTGCGTCCCGGCCGATTCGATCGTCAAGTGTTTGTGGGCTTACCCGATATCAGGGGGCGCGAGCAAATCCTCAAAGTACACATGCGCAAAGTGCCTTTGGACGAAAAGGTCAAGGCTTCCATTATTGCCCGTGGAACTCCCGGTTTTTCTGGAGCGGATTTGGCCAACTTGGTCAACGAAGCCGCTCTGTTTGCTGCCCGCGCTAATAAGCGACTGGTAACCATGGAAGAATTCGAGAAAGCCCGTGACAAGATCATGATGGGCGCCGAACGAAAAACCATGGTGATGAGTGAGAAAGAAAAACAGAATACGGCTTATCACGAAGCTGGGCATGCGATTGTGGGGCGATTGGTCCCAGAGCATGATCCGGTGCACAAGGTGACCATCATTCCCAGAGGTAGAGCGTTGGGCGTCACTCAGTTTTTGCCAGAAGATGATAAGTACAGTCTGAGTAAGAGAGCCCTTCAGTCTCAAATTTGTACGTTGTTTGGCGGCCGTATTGCAGAAGATATGACGCTGGGCAGTGACGGTGTCACGACTGGGGCCCAAAATGACATCGAGCGCGCGACTAGCTTGGCCAGGAATATGGTGACCAAGTGGGGCTTGTCGGACAAATTGGGGCCGCTTCATTATGGTGAAGACGAAGGCGGTATGACCGGTGCCGGTGGGCCGCCGAATTACTCAGGTGCAACGTCGAAGACCATTGATGAAGAGGTTCGACGTATCATTGATGATTGTTACAACAAGGCCCAGTCTATTCTTGAGGAAAATAGAGACATCCTCGAATCCATGAAAGATGCCTTGATGGAGTACGAGACAATCGATGCTGAGCAGGTTGACGACTTGATGGCTCGACGCAAAGTCAGACCGCCTAGGGATTGGCACGACGACGATTTTTCCGGCCAAGCGACCGGCAGCGACGGTGATCAAAAGCCAGACAGCAAATCGAGCCCGATAGGAGGGCCGGCGGAGAATCACTAG

Transcript

ANN34040-RA

Protein

Uniprot

Uniprot term	Description
P63344	ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhi OX=90370 GN=ftsH PE=3 SV=1
P63343	ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=ftsH PE=3 SV=1
Q8X9L0	ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli O157:H7 OX=83334 GN=ftsH PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01434	Peptidase_M41	Peptidase family M41	Domain	Interproscan
PF06480	FtsH_ext	FtsH Extracellular	Family	Interproscan
PF01728	FtsJ	FtsJ-like methyltransferase	Family	Interproscan
PF17862	AAA_lid_3	AAA+ lid domain	Domain	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR000642	Domain	Peptidase M41	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011546	Domain	Peptidase M41, FtsH extracellular	Interproscan
IPR002877	Domain	Ribosomal RNA methyltransferase, FtsJ domain	Interproscan
IPR015507	Family	Ribosomal RNA large subunit methyltransferase E	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR037219	Homologous_superfamily	Peptidase M41-like	Interproscan
IPR041569	Domain	AAA ATPase, AAA+ lid domain	Interproscan
IPR003960	Conserved_site	ATPase, AAA-type, conserved site	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR005936	Family	ATP-dependent zinc metalloprotease, FtsH	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23076	METALLOPROTEASE M41 FTSH	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004176	Molecular Function	ATP-dependent peptidase activity	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0032259	Biological Process	methylation	Interproscan
GO:0001510	Biological Process	RNA methylation	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0030163	Biological Process	protein catabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03798	ftsH, hflB; cell division protease FtsH	EC:3.4.24.-	Chaperones and folding catalysts	ko03110	deepkoala