Detailed information of ANN34115-RA in Leptoseris scabra

Genomic Location: Scaffold_16__1_contigs__length_5761142:4416289...4420031
NR annotation: XP_029190053.2, poly(U)-specific endoribonuclease-B-like [Acropora millepora]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A8E627Uridylate-specific endoribonuclease D OS=Xenopus laevis OX=8355 GN=endou-d PE=2 SV=1
A8E624Uridylate-specific endoribonuclease C OS=Xenopus laevis OX=8355 GN=endou-c PE=2 SV=1
Q21109Endoribonuclease endu-1 OS=Caenorhabditis elegans OX=6239 GN=endu-1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001018 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09412
all species →
XendoUEndoribonuclease XendoUFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018998
all species →
DomainEndoU ribonuclease, C-terminalInterproscan
IPR037227
all species →
Homologous_superfamilyEndoribonuclease EndoU-likeInterproscan
IPR039787
all species →
FamilyPoly(U)-specific endoribonucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12439
all species →
PLACENTAL PROTEIN 11-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004521
all species →
Molecular FunctionRNA endonuclease activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN34115-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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