Detailed information of ANN34216-RA in Montipora grisea

Genomic Location: Scaffold_5392__1_contigs__length_29527:25397...26999
NR annotation: MCE2401285.1, tryptophan synthase subunit beta [Candidatus Poribacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8R9M9Tryptophan synthase beta chain OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=trpB PE=3 SV=1
B0K8T6Tryptophan synthase beta chain OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=trpB PE=3 SV=1
B0K2T9Tryptophan synthase beta chain OS=Thermoanaerobacter sp. (strain X514) OX=399726 GN=trpB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00291PALPPyridoxal-phosphate dependent enzymeFamilyInterproscan
PF028262-Hacid_dh_CD-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001926DomainTryptophan synthase beta chain-like, PALP domainInterproscan
IPR036052Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR006140DomainD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domainInterproscan
IPR023026FamilyTryptophan synthase beta chain/beta chain-likeInterproscan
IPR029753Conserved_siteD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved siteInterproscan
IPR006654FamilyTryptophan synthase, beta chainInterproscan
IPR006653Conserved_siteTryptophan synthase, beta chain, conserved siteInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48077TRYPTOPHAN SYNTHASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0000162Biological Processtryptophan biosynthetic processInterproscan
GO:0004834Molecular Functiontryptophan synthase activityInterproscan
GO:0006568Biological Processtryptophan metabolic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01696trpB; tryptophan synthase beta chainEC:4.2.1.20
Phenylalanine, tyrosine and tryptophan biosynthesisko00400deepkoala

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