Gene detail

Detailed information of ANN34221-RA in Montipora grisea

Genomic Location: Scaffold_5982__1_contigs__length_28120:20842...22602
NR annotation: XP_001021333.2, DNA repair helicase [Tetrahymena thermophila SB210]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P26659	General transcription and DNA repair factor IIH helicase subunit XPD OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rad15 PE=1 SV=2
Q8W4M7	General transcription and DNA repair factor IIH helicase subunit XPD OS=Arabidopsis thaliana OX=3702 GN=XPD PE=1 SV=1
P06839	General transcription and DNA repair factor IIH helicase subunit XPD/RAD3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RAD3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06733	DEAD_2	DEAD_2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001945	Family	RAD3/XPD family	Interproscan
IPR010614	Domain	RAD3-like helicase, DEAD	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006554	Domain	Helicase-like, DEXD box c2 type	Interproscan
IPR013020	Family	ATP-dependent helicase Rad3/Chl1-like	Interproscan
IPR045028	Family	Helicase superfamily 1/2, DinG/Rad3-like	Interproscan
IPR014013	Domain	Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11472	DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003678	Molecular Function	DNA helicase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006289	Biological Process	nucleotide-excision repair	Interproscan
GO:0016818	Molecular Function	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	Interproscan
GO:0003684	Molecular Function	damaged DNA binding	Interproscan
GO:0006366	Biological Process	transcription by RNA polymerase II	Interproscan
GO:0045951	Biological Process	positive regulation of mitotic recombination	Interproscan