Genomic Location: Scaffold_542__1_contigs__length_87417:18095...20719
NR annotation: WP_089372042.1, DNA mismatch repair protein MutS [Dokdonia pacifica]
Species Montipora grisea · all data for this species · gene families
| CDS |
| ANN34246-RA |
| Transcript |
| ANN34246-RA |
| Protein |
| ANN34246-RA |
| UniProt accession | Description |
|---|---|
| A0LXZ7 | DNA mismatch repair protein MutS OS=Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803) OX=411154 GN=mutS PE=3 SV=1 |
| A5FJ63 | DNA mismatch repair protein MutS OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=mutS PE=3 SV=2 |
| A6GWN3 | DNA mismatch repair protein MutS OS=Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86) OX=402612 GN=mutS PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005817 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05192 all species → | MutS_III | MutS domain III | Domain | Interproscan |
| PF05190 all species → | MutS_IV | MutS family domain IV | Domain | Interproscan |
| PF00488 all species → | MutS_V | MutS domain V | Domain | Interproscan |
| PF01624 all species → | MutS_I | MutS domain I | Domain | Interproscan |
| PF05188 all species → | MutS_II | MutS domain II | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR017261 all species → | Family | DNA mismatch repair protein MutS/MSH | Interproscan |
| IPR005748 all species → | Family | DNA mismatch repair protein MutS | Interproscan |
| IPR016151 all species → | Homologous_superfamily | DNA mismatch repair protein MutS, N-terminal | Interproscan |
| IPR007696 all species → | Domain | DNA mismatch repair protein MutS, core | Interproscan |
| IPR007861 all species → | Domain | DNA mismatch repair protein MutS, clamp | Interproscan |
| IPR000432 all species → | Domain | DNA mismatch repair protein MutS, C-terminal | Interproscan |
| IPR036187 all species → | Homologous_superfamily | DNA mismatch repair protein MutS, core domain superfamily | Interproscan |
| IPR045076 all species → | Family | DNA mismatch repair MutS family | Interproscan |
| IPR007695 all species → | Domain | DNA mismatch repair protein MutS-like, N-terminal | Interproscan |
| IPR036678 all species → | Homologous_superfamily | MutS, connector domain superfamily | Interproscan |
| IPR007860 all species → | Domain | DNA mismatch repair protein MutS, connector domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11361 all species → | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006298 all species → | Biological Process | mismatch repair | Interproscan |
| GO:0030983 all species → | Molecular Function | mismatched DNA binding | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0003690 all species → | Molecular Function | double-stranded DNA binding | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0140664 all species → | Molecular Function | ATP-dependent DNA damage sensor activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K03555 | mutS; DNA mismatch repair protein MutS | - | DNA repair and recombination proteins | ko03400 | deepkoala |
