Gene detail

Detailed information of ANN34391-RA in Montipora grisea

Genomic Location: Scaffold_9085__1_contigs__length_20678:15210...17752
NR annotation: ETW97291.1, hypothetical protein ETSY1_23255 [Candidatus Entotheonella factor]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN34391-RA

ATGTGGGCGTTTCTGGTATTGTTCGGTATCTCACTGTTTTCAGAGTTCATCGCCAACGACAAGCCGCTCTTGATCCGATTCAACAACAATTTCTATTACCCGATCATCCAGTCATATCCGGAGACAGAGTTCGGTGGTATTTTCGAGGCCGAAGCGGACTACAAGGACCCCTACGTAGAGGAACTGATCCAGCAGGACGGATGGATCATCTGGACCTTGATACGTTACGATCATCAGACCGTGGCCTGGAATCTACCGTCACCGGCACCATCGTCTCCCGACTGGGAGCATTGGCTGGGTACGGACGATCAGGCAAGGGATGTTGTGGCGAGACTGCTATACGGTTTCAGGATATCCGTACTGTTCGGATTCACGCTGACTGTGATTTCTGCGATAATCGGCGTGGCTGCAGGTGCTGTGCAGGGATTTTTTGGTGGTTGGCTGGATTTACTGTTTCAACGGTTTATTGAAGTCTGGTCCGGACTGCCCACATTGTATTTGCTGATCATTCTGGCCAGTGTTGTCGAGCCCAATTTCTGGTGGTTGTTGGGATTGTTGCTGTTGTTTTCCTGGATGGGGTTCGTCGGTGTGGTGCGTGCTGAATTTCTGCGAGCGCGCAACTTTGACTACGTCCGGGCAGCCCGGGCACTGGGCGCGAAGAATTCCAGGATCATATTTCAGCATGTACTGCCGAACGCGATGGTTGCAACCATGACCTTCATGCCATTCACACTTGCGGGATCGGTCACCGTTCTGACCTCCTTGGATTTTCTTGGAATCGGACTGCCACCGGGTTCCGCCTCCTTAGGCGAGCTGCTTGCCCAGGGTAAGGCGAATTTGCAGGCACCATGGTTGGGGTTAACCGGCTTTTTTGTCATTTTGATCATGCTCAGCCTGCTAATGTTTATCGGTGATGCGGTGCGTGCTGCATTCGATCCGAGGAAAACCGAACAGACGGTTGTGGAAACGAGCGACGCAGTAAAGAATGTATCGTTCGACATATTTCCGGGCGAGACACTCGCGATCGTCGGTGAAAGCGGATCAGGAAAGACTGTGACCGCTCTTTCCATCATGCAGCTTTTGCCATATCCGAATGCCTATCACCCGTCCGGCAGTATTCGGTACGAAGATCAGGAATTACTTGGTGCGTCACAGGAATTGCTTCAGGACTATCGGGGAGACCGCATTGGAATGATCTTCCAGGAGCCGCAGACATCGCTGAATCCTCTTCATACAATTTCCAAGCAGATCAGCGAGACATTGATCATCCATCGCGGCATGAGCAAATCTCACGCTGCCGACCGTTCACTGGAACTGCTGGAACTGGTTCGAATCCGCAATGCGCGCGAGCGTATGAGTTCCTATCCACATCAGTTGTCCGGCGGTCAGCGACAAAGAGTGATGATTGCCATGGCTATTGCCAATGAACCGGGGCTTTTGATCGCCGATGAGCCAACGACCGCGCTGGATGTGACCATACAGGCAGAGATTCTTTCGCTGCTTCGCGATCTTCAGCAAGAATTAGGCATGTCAATGTTGCTGATCAGTCACGATCTGAACATCGTGCGCAAGCTCGCGGATCGAATTTGCGTGATGCGTCATGGTGAATTTGTTGAAACTGGAAGCCGGGAACAGGTATTCGGGTCGCCGCAGCATGTCTACACGCGGATGCTGCTTGATGCTGAACCTTCCGGCCGCTCGGAACAACCAAATGCGGCGGCACCGGTCATCATCGATTCGGAGTCGGTACGGGTGTGGTTTCCGGTTCGAAGGGGGGTGTTGCGCAGAACAGTCGGTCACATCAAGGCGGTTGATGATGTCAGCGTAACGGTACGCGAAGGCGAGACAGTAGGCGTTGTCGGTGAATCCGGTTCGGGAAAGTCATCGCTCGCACTGGCTTTGTTGAGGCTGATCAGTAGTCGCGGCAGCATACGGTTTGAGGGTGAGGAGATCCAGGGAAGAAAGTCGAAAGAACTTCGAGAATTGCGTCGTGGAATGCAGATCGTATTTCAGGACCCGTATGGCAGTCTTAGTCCCAGGATGACAGTATCCGACATCATCGCGGAGGGGTTGCGCGTACATGAGAGAAACATGACCAATTCCGAACGGGAGCAGAGAGTCATCGAGGTGATGAAAGAAGTGGAGCTCGATCCGAACACCCGTCATCGCTACCCGCATGAATTCTCCGGTGGCCAGCGTCAGAGAATCTCGATCGCACGGGCGATTATTCTGAAGCCGAAATTCATCGTGTTGGATGAACCGACATCCGCACTTGATCGGTCTGTCCAATCACAGATTATTGAGTTGCTGCGTCGCCTTCAGAAAAACCATTCCCTGGCATACATGTTCATCAGTCACGATCTCGCTGTCGTGCGTGCGATGTCCAATTCGGTAATCGTGCTCCGAGAAGGACTGGTAATCGAGCAAGGCAGTACCGATCAGATTTACGACAATCCTCAAGACCCTTACACCAAGCTTTGA

Transcript

ANN34391-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A9CKL2	Peptidoglycan transport ATP-binding protein YejF OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=yejF PE=3 SV=1
P33916	Uncharacterized ABC transporter ATP-binding protein YejF OS=Escherichia coli (strain K12) OX=83333 GN=yejF PE=1 SV=1
Q6D3A9	Glutathione import ATP-binding protein GsiA OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=gsiA PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009449 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08352 all species →	oligo_HPY	Oligopeptide/dipeptide transporter, C-terminal region	Family	Interproscan
PF00528 all species →	BPD_transp_1	Binding-protein-dependent transport system inner membrane component	Family	Interproscan
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000515 all species →	Domain	ABC transporter type 1, transmembrane domain MetI-like	Interproscan
IPR013563 all species →	Domain	Oligopeptide/dipeptide ABC transporter, C-terminal	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR017871 all species →	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR050319 all species →	Family	ABC Transporter ATP-Binding	Interproscan
IPR035906 all species →	Homologous_superfamily	MetI-like superfamily	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43776 all species →	TRANSPORT ATP-BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0015833 all species →	Biological Process	peptide transport	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN34391-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.