Genomic Location: Scaffold_5932__1_contigs__length_28242:18157...20330
NR annotation: MCG8536658.1, diguanylate cyclase [Pseudomonadales bacterium]
| CDS | ||||
| ANN34404-RA | ||||
| Transcript |
| ANN34404-RA |
| Protein |
| ANN34404-RA |
| Uniprot term | Description |
|---|---|
| Q55434 | Phytochrome-like protein cph2 OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=cph2 PE=1 SV=1 |
| P77395 | Chaperedoxin OS=Escherichia coli (strain K12) OX=83333 GN=cnoX PE=1 SV=2 |
| P43785 | Thioredoxin OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=trxA PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF14561 | TPR_20 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF00085 | Thioredoxin | Thioredoxin | Domain | Interproscan |
| PF14559 | TPR_19 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF00990 | GGDEF | Diguanylate cyclase, GGDEF domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050469 | Family | Bacterial Diguanylate Cyclase | Interproscan |
| IPR017937 | Conserved_site | Thioredoxin, conserved site | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR000160 | Domain | GGDEF domain | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR029787 | Homologous_superfamily | Nucleotide cyclase | Interproscan |
| IPR013766 | Domain | Thioredoxin domain | Interproscan |
| IPR036249 | Homologous_superfamily | Thioredoxin-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0043709 | Biological Process | cell adhesion involved in single-species biofilm formation | Interproscan |
| GO:0052621 | Molecular Function | diguanylate cyclase activity | Interproscan |
| GO:1902201 | Biological Process | negative regulation of bacterial-type flagellum-dependent cell motility | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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