Gene detail

Detailed information of ANN34422-RA in Leptoseris scabra

Genomic Location: Scaffold_18__1_contigs__length_3402158:3229906...3235271
NR annotation: CAH3107581.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN34422-RA

ATGAAGAGAGTTCACGAAGAAGCTTTTGGTCAGGGACCAAGCACATCAAGTAACGATGAGTCACAGCTGCACATCAATGTCATGTTTCTATGTGAGGAGTGGGTGTCATCTAAGGGAGGATTGCCAACCTTCAACAGAGAATTTGCAGTAAATCTGGCTAAAACATCAGGTGACAAGATCAAGGTTCACTGCTACGTCTCTCAAAGCAATGAATCAGACAGAGAGGATGCCAGGAAAAATGGAGTGAACTTAATCACGGCAAAGGCTATTCCAGGAGCTTCTAATCCCCTAGATTGGCTGAAATTTCCACCTCCAGAACTTCCACATCCTGATATTGTGATAGGTCATGGACGTAAGTTTGGTACCCCTGCCTACTGTATTGTGCGAACTACAAACTGCAAGTGGGTGCAGTTTGTGCATGTCTATTGTGAAGACCTTGGAAAATACAAACAAACCGAAGAAACCAGAAGCTCTGTAACTGATACAATTGAAGATAATGAGAAGAAGCATAAAGTAGAAGTTGAACTCAGCAAAGCAGCAGATGCAGTTGTTGCTGTTGGCTCAAGGCTGCAGCAGAAGTACAGTAGATGCCTCCCAGGCAAAGAGGTACAAGTCATCACACCTGGAATTTTGGAAAAGTTTTCTCTTCTGTCAGATCAGAAGCTAGACAAAGCTACTTGTCCAGAGGAGTTTAGTGTCTTTGTCTTTGGCAGAGGAACATATGAAGATCTATCTCTGAAAGGGTACGATATTATTGCTGATGCCATTGGTTCACTTGGAGAGAAATTTAAGATGACTTTTGTTGGTTCGCCTGAAGGTCAACACAGAAGCATAGAGGATTGGTTTCTACAAAACACAAAGATCACACGTAAACAAGTTACAATTCGCAGTTACTGTGATCAAGAGGAGTTGAAGATGATGTTCCATGAAGCAGACTTAGTTGCTCTTCCGTCTCGTACTGAAGGCTTTGGCCTGGTGGCCTTGGAAGCCATTTCTGCTACTGTACCAGTTCTTGTTAGCAGTGAATCTGGAATAGCCAAAGCACTAGAGAAAGTAGATGGTGGAGATTCTGTTACTGTTAAATCAGAAGATCCAGAAGAGTGGTCCCAGAAAATCAAGCAGTTGTCCGAACAGAAGCCAGGAGAAAGACATGGCACTGCCACTTGTCTCAGAGAGAACTACAACAAGACATACCCTTGGAACACTCAATGTGAGAAATTCCAAAAAATGATACAGGATTTAACAGACAAACCATCTCATTCAGCTAAATTGAGGAGAATGTATCCATCAGGGATTTCTAGAGGCAAGGACAAGATGACTTCTTTTCTTGCTGACTTCAAGGTTGTCACTGGTGCCACATATCAAGTGAATATAGCAAACTTGGGTGATGCAGAAGCTGTGGACAAGGAAAAGACTCCACCCGCTGAAAACAAGGAATGGAATGAGCTGCACTCGGCTTCACAGGGAGGTGTTGTTGCCATAATTGAGACCATGCTATCTCTTGGAATTGACCTAAATTCAAAAGACTGTCTTGGTAGAACACCGCTGTTAGTTGCAGCTGCCAGTGGTAAAATGCAGGCAGTTAATTTTCTTCTTGAGAAAGGTGCAGATCCATTCCTAACAACCAACGAAGGAAGAAATTTGCTACATGCTGCTGTGGAAGGTGGTAATGTCTTAATTGTGGAAACAATCAAAGCAGATCCACTTTTGAAGAGCAAATTGGGAAGGAACGTGCTGTTGATTGCATCACAATATTGCAGCATTGCTGTCCTAGAGCAACTGCTTTCTGTTGTTGACATTAATTCAAGAGATGACGAGGGCAACACACCATTGATGGTTGCTGCAGCCTGTGCCAATGTTCAGGCTGTAAACTATCTTCTTGAAAAAGATGCAGATGTGTTATTGACAGGCAAAAGTGGATGGAGTCTGTTGCATTTTGCTTCTCAAGGTGGCAATGTTGCCATTATTGAGACTATCCTTTCAAAAGGACTTGACATTGATATTAAAGATAATTATGGCAAAGGTATGACACCTTTGGCTGTTGCCATTGTGTTCAAGAATTTGGAGGCCTTGAATTGTCTTCTTAACAAGGGGGCTGATCCATTTGTGGAGAACAACGTCTCTAGTTCAAATTCACTACACCTTGCCGCAATAGGAGGTGACATTGACATCATCAAAGCCATACTTTCACATGGATTTGACATAAACATTAAAAGTACTGAAGGTCTGACGTCACTAATGCTTGCAGCCTACACTAAGAATGTGGCAGTGGTAGACTGTTTCCTTGACAATGGTGCAGATCCAACTTTGAGAGACAACTTTGGCAGGACTTGTCTACACTTTGCTTCACAAGGTGGGGATGTCACCATCATAAAGAAGTGTCTTTCTCTTGGACTTGACATTGAATCTAAAGACGTTGACGGTAAGACACCTTTAATGATCGCAGCTGCTGAAGGTAATTCTGATGCTGTGGAGTTTCTGTTAGAGAGGAACGGTGCTTTTCAGTTAAATCAAGGCAGTGCACAGTAA

Transcript

ANN34422-RA

Protein

Uniprot

Uniprot term	Description
A1R8N8	D-inositol 3-phosphate glycosyltransferase OS=Paenarthrobacter aurescens (strain TC1) OX=290340 GN=mshA PE=3 SV=1
Q6NJL3	D-inositol 3-phosphate glycosyltransferase OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) OX=257309 GN=mshA PE=3 SV=1
D5UJ42	D-inositol 3-phosphate glycosyltransferase OS=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / BCRC 11376 / JCM 18109 / NBRC 3775 / NCIMB 8073 / NRS 134) OX=446466 GN=mshA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF20706	GT4-conflict	Family 4 Glycosyltransferase in conflict systems	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR050842	Family	Cul2-RING E3 Ligase Substrate-Recognition Fem-1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24173	ANKYRIN REPEAT CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan