Gene detail

Detailed information of ANN34431-RA in Montipora grisea

Genomic Location: Scaffold_679__1_contigs__length_79874:5301...7690
NR annotation: MYE23418.1, amidase [Gammaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN34431-RA

ATGAGTGAATTAGCTTTCAAACCGGCCCACGAACTTGCGTCGATGATCCGCGAGCGTGAGATTTCAAGTGTCGAGCTTCTTGACTACTATTTCGATAGAGTTGACGCGCACAACGCTGGCATCAACGCCATCATTTGGCAGATTCGTGACGAAGCACGGGCACGAGCCAAGCAGCTCGATGATGCCTTGAGCGCAGGCATCGTCGTCGGACCGCTTCACGGCGTGCCGATGACGGTAAAGGAATCCTACGATGTGGCCGGCACCCCGTCGACATGGGGAGCTCCGTATCTCAAGGACAATATTGCCGAAAACGATGCATTGTCGGTCGCACGCTTAAAAGCTGCTGGTGCTGTCATTTTCGGCAAGTCGAACGTACCGCTGCTTCTCTCGGATTTTCAAAGCTACAACGACGTCTACGGCACGACGAACAATCCGTGGAATAAGAAACACGTTCCAGGCGGTTCATCGGGCGGTTCGGCAGCAGCGCTTGCCGCGGGCTTGGTCGGTTTGGAAACCGGCTCGGATATTGGCGGTTCGATTCGTAATCCGGCGAATTTTTGCGGAGTGTTCGGGCACAAACCGACTTGGAATCTACTCCCGCCGAGAGGTCACGCGATGCCGGGGATACTGACGCCGTCGGACCTGTCTGTGATCGGCCCGCTCGCACGATCGGCCACCGATCTTGAAATAGCAGTCAATGCGATGGCTGGGCCAGACGAAATTCAGTCTCGTGGTTTGAGAGTCGCGCTGCCGCAGCTTGGGAAACAGGCATCCGAACTTCGAGTTGCCGTGTGGCGGAACGATGACATCGCTCCGGTGGACGCGGAAGTTACAGCACGCGTCGATAAAGTGGCATCGTGCCTCGAACGACTTGGGGCGTACGTAAATGCTGAAGCACGACCGAATTTCACAGCGGCGCACACGCATCTGGTCTATCAGTATTTGCTCAATGCCACGATGTCGTGCCGTGTTCCCATCGAGCAGTACGAACGCTTGCTTGAACATGCGAATAATCTCGCCAAGGATGACGACAGTCGTTCAGCTACCTTGCTTCGAGCTCAAGTCACGAGTTTTCGGGATTGGATCGTTTACAACGAGCAGCGTACGCACATTCGATGGGCGTGGCACGAGTTTTTCAAAGACTACGATATCCTGCTCACCCCGATCATGGCGACGCCGGCGTTTCCGCACGATCACCGCCCTATGGGCGAACGATCGATTTTGGTCAATAACGAGGACCAGCCTTATTTCTCGCAGTTGTTCTGGGCTGGCTTGACGACAAACGCCTATTTGCCGTCGACGATCGTACCCACGGGACCGTCTCGCAGCGGCTTGCCTATTGGTGTCCAAGTGGCCGGTCCGGAGTACGGGGATCTGATCACCATCGGCGTTGCAAAGGTCTTGGAACGCGAGGGTTTTGCCTTTCAGCCGGCGCCAGACTATACTCGCCTGCGCGCAGAGTTCGGGTTTGCTCCGGTTACCATTGAATCATTTGCGAACTATCCGATAAACGCTGGTTTGGCCTCATCCGCCGCGGGGTTCGCAGCGCTGGTTACAGCGTTGAATGAGGCGTTCGCGTGGCATCTCACGCGTGATGAGTTGGCCGAGTGGGCGCGGTTGGCGTCGGGTTCGGCCGCACGGTCGATGCACGGTGGTTTCGTCGCTCTCGATGTGGACGGAAACCGATGTTTGTGCAGCCGAGTACGCAAAGGCAGTGCATGGCCTTTGGAGGTGGTAGTCGCGGTGACCGACGAAGCAAAGAAGCAAATTTCCTCGACTCGCGGCATGTTGATGTCACAGCAGACGTCGCCGTACTACGACGCGTGGGTGCGAACTGCCCGTGTCGATTTTGAGGCAGCGCTTCGCGCGATCGAAGCGATGGATTTCGAACGGCTTGGGACAATCGCCGAAGCGAGTTGTCGCAAAATGCATGCCTTAATGCTGGCGACCGAACCGCCGTTGCTCTATTGGAATGCTGGAACAATCAATGCGTTAAACGCTGTTGCTGAATTGCAATCTAGCGGGATACCGGTGTTCTATACGATCGATGCCGGACCGCAGGTCAAGGCGGTGTGTTTGCCAGGATACGCCGATGCCGTAGCAGGCAAGCTCCGCGATACGGACGGCGTGCTGTATACGCTGACGTCGGGTATTGGCAGCGGTGCACGCATCGTCTAG

Transcript

ANN34431-RA

Protein

Uniprot

Uniprot term	Description
Q2RGY4	Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=264732 GN=gatA PE=3 SV=1
C6E6Z2	Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter sp. (strain M21) OX=443144 GN=gatA PE=3 SV=1
Q3AKH0	Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain CC9605) OX=110662 GN=gatA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00288	GHMP_kinases_N	GHMP kinases N terminal domain	Family	Interproscan
PF01425	Amidase	Amidase	Family	Interproscan
PF18376	MDD_C	Mevalonate 5-diphosphate decarboxylase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036554	Homologous_superfamily	GHMP kinase, C-terminal domain superfamily	Interproscan
IPR036928	Homologous_superfamily	Amidase signature (AS) superfamily	Interproscan
IPR006204	Domain	GHMP kinase N-terminal domain	Interproscan
IPR029765	Family	Diphosphomevalonate decarboxylase	Interproscan
IPR023631	Domain	Amidase signature domain	Interproscan
IPR052739	Family	Fatty-acid amide hydrolase 2	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR041431	Domain	Mvd1, C-terminal	Interproscan
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43372	FATTY-ACID AMIDE HYDROLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004163	Molecular Function	diphosphomevalonate decarboxylase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0019287	Biological Process	isopentenyl diphosphate biosynthetic process, mevalonate pathway	Interproscan
GO:0012505	Cellular Component	endomembrane system	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01426	E3.5.1.4, amiE; amidase	EC:3.5.1.4	Styrene degradation	ko00643	deepkoala