Detailed information of ANN34455-RA in Montipora grisea

Genomic Location: Scaffold_8036__1_contigs__length_23509:11871...14141
NR annotation: MXX96293.1, polyribonucleotide nucleotidyltransferase [Rhodothermaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2S1P1Polyribonucleotide nucleotidyltransferase OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=pnp PE=3 SV=2
Q8A4N6Polyribonucleotide nucleotidyltransferase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=pnp PE=3 SV=1
A6L0A5Polyribonucleotide nucleotidyltransferase OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=pnp PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00575S1S1 RNA binding domainDomainInterproscan
PF00013KH_1KH domainDomainInterproscan
PF03725RNase_PH_C3' exoribonuclease family, domain 2DomainInterproscan
PF03726PNPasePolyribonucleotide nucleotidyltransferase, RNA binding domainDomainInterproscan
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012162FamilyPolyribonucleotide nucleotidyltransferaseInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR003029DomainS1 domainInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR004087DomainK Homology domainInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR015847DomainExoribonuclease, phosphorolytic domain 2Interproscan
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR036456Homologous_superfamilyPolyribonucleotide nucleotidyltransferase, RNA-binding domain superfamilyInterproscan
IPR015848DomainPolyribonucleotide nucleotidyltransferase, RNA-binding domainInterproscan
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004654Molecular Functionpolyribonucleotide nucleotidyltransferase activityInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0006396Biological ProcessRNA processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00962pnp, PNPT1; polyribonucleotide nucleotidyltransferaseEC:2.7.7.8
Transfer RNA biogenesisko03016deepkoala

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