Gene detail

Detailed information of ANN34457-RA in Montipora grisea

Genomic Location: Scaffold_8036__1_contigs__length_23509:16641...19616
NR annotation: MXW15856.1, translation initiation factor IF-2 [Rhodothermaceae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN34457-RA

ATGGCGACAACGGTAAGAAAGAGATTTAAGAAAGTTCGGCTTCACAAGGTGGCCAAGGAGTTCAACTTGGCTATCGACACTATTGTCGAGCACTTGGATAAGGCTGGACACAGCAGTAAACTGAAGGGCAAGGGCTTCAATGCCGCGATCACGGATGAGGAAGCTTATCTCGAGCTTATCAGTCATTTTGCAGCAGACAAGAATGCGCGTGCCCGTGTACAGGAGTTAAGGGCCGCACGAGAAGCGGAATTAGCCGAAGCACAAGGGGATTCGGCTCCAACCGAGGTACCTGAGGTAGTCAGCCCCCGGCTTCCTACTGACACGGCCGTTGTGGAGCCTCCACAGCCTGTGGATACTGTGGAACCCGCGGAACCCAAGCCTCTGCCGCCTACGGAAACTGTGGAACCTAAGCCGCCGCCACCTACCGAAACGCAGGCGGCCGAACCTCCACAGCCTACCGATACGCAGGAAATCGAACTTCCGTCGCCTGTGGAGCCGCCGGTAGTCGAGCCTCTGTCGCCCGTCGACACGCAGGAAATCGAATCGCCGCCGCCTGTGGAGCCGCCGGTAGTTGAGCCTCCATCGCCTACCGACGAACCGGAAATCGAACCTCCGCCACCTATCGATACACCGGTGGCCGAACCGCCTGCGAGCGAACCGATTGCTGAGGAGGATCAGCCTGAACCCTCTATCACCGCCGATCAGCAGGTGGAGGACGTGTCACCCGATATAGTGCCTGAAGAAGCTGCAGCTCCCAAGCTAAGCGTCCCAACGCCTGCGGATGTTGCACCAACAGTGTCGGAGTCGGAAGTTGAGTCGACCGCCGAGGTGGAAGAGGCCGAACAAAGTGTCATTACGGCGGATCGGTACAAACTCCAGGGAACAACGGTGGTTGGGAAGATTGACCTCAAGGCCGTTGATGGTGGCACCACCCCTGCTACAAAACGCAAGAAGCGCAAGCGTAAGCGGAAAGCTACAGCCGCACCGCCGGTCGCCCCCAAGGATCGGACAACCCAAAAGCCAAGTACGGGCCCCGGTAAGCGCAGGCGCACACGAAAGCGCAAGTCTAAGGCAGATAAGGAAGCTGTTGACCAGACAATTCAGGATACGCTGCACACCATTGACCATGGCTCTGCACGCGTGCGACAAAGGCGACGCCGCGCCCGCAGACAACAACGCGCAGAGGAACGAATGAATGTGCAGCTGGCACAGGAGCAACAGGATCAGGTGGTCCGTGTTACTGAATTTGTGTCTACTGGCGAATTGGCTGACACGATGGGTGTTGCCGTCACGGACGTAATCGGTATGCTCTTTGACGCTGGCATGATGGTGTCCATCAATCAGCGATTGGACGCGGACACGATTACATTCGTAGCCGACGAGTTTAACTACACAGTGGAATTCATCACAGAATTCGGCACGTACGATATCGTGCTGGAGGAGGATGCTCAGGAAGATCTGATTCCCCGTGCCCCGGTTGTGACCGTTATGGGCCACGTTGACCATGGTAAGACTTCCTTGCTGGACTATGTTCGGAGTGCCAATGTAGCTGTCGGTGAATCCGGTGGCATTACGCAGCATATCGGGGCCTATCAAGTACAGCTGGACAATGGCCGCGAAGTGACTTTCTTGGACACGCCCGGCCACGAGGCTTTTACCGCCATGCGTGCACGCGGTGCAAAAGTGACCGATATGGTTATCCTGGTGGTTGCTGCCAATGACTCTGTAATGCCGCAAACAATCGAGGCCATCAATCACGCCAAGGCGGCAGAAGTACCTGTCATTGTCGCGATCAACAAGATAGATTTGCCGGAAGTGGACACGCAGCGCGTAATGCAGCAATTGTCGGAACATGGCGTATTGGTGGAGTCGTTCGGTGGCAATGTGCAGTGCGCCAAGGTATCGGCCAAGACCGGGCAAGGCATTGACGATCTGTTGGAAAAGGTGCTATTGGAGGCTGACCTCCTAGAGCTTAGGGGTAACCCCAAACGACGGGCCCAAGGCATTGTGATCGAAAGTCGATTGGATCGCGGCCGAGGTAATGTGGCCACTGTACTAGTGCAGAACGGTACGCTTTCTGTGGGTGATCCATTTGTGGCTGGGATATACGGTGGGCGCGTACGCGCGATGTTCGATGAGCGGGATCAGCGCATTCGTAACGTCGGCCCTAGTGAACCTGCGCTGGTCCTAGGATTACCGGGGCAACCTACCGTCGGTGATCAGTTTGTAGGTGTGGCCGATGAGAACGAGGCTAAGGCGATTTCGCAGCGACGACAGCAAATTTGGCGCGAGCAAAAGTTGCGCCAATACAAGCATGTACGACTGGAGGATATTGGAAGGCGCATGGCGCTTGGCGATTTCAGCGAACTCAACTTGATCATCAAGGCCGATGTCGGTGGTTCGGTGGAAGCCATCACTGACTCGTTGCAAAAGCTGTCCACCGATGAAGTGGCCGTCAACATTATTCATGCAGGCGTCGGTGCCATAACGGAAAGCGATGTGATGTTGGCATCCGCCTCAGATGCAGTCATCATTGGTTTTCAGGTACGTCCTACATCTGGAGCTCGGGCGGCCGGAGAGCGCGAAGAGATTGATATTCACACATATTCAATTATCTACGACGCGATCGAGGATGTGCGCGATGCGCTCGAGGGGCTGTTACAACCTGAAGAGACCGAAAAGATCATCGGAGTTGCCGAAGTACGTGAAGTGTTCAAGGTGCCCAAGGTCGGTAGTATTGCGGGCTGCTACATCTCGGAGGGACGTATTCGGCGCAGTGACACCGTGCATGTTCTTCGCGAGAATGTCGTCATCTACAATGGAAGGCTTCGGTCGCTACGCAGGTTCAAGGATGATGTGCGTGAAGTCGTCAACGGTTACGAGTGTGGCATTGGCGTGGAGAATTTCAACGACATCAAAGTCGACGATCAGATCGAGGCCTACGAGATCGTCAAGATCAAACGCACGCTCGATTGA

Transcript

ANN34457-RA

Protein

Uniprot

Uniprot term	Description
Q2S1N7	Translation initiation factor IF-2 OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=infB PE=3 SV=1
A0LXQ1	Translation initiation factor IF-2 OS=Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803) OX=411154 GN=infB PE=3 SV=1
A5FJF9	Translation initiation factor IF-2 OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=infB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03144	GTP_EFTU_D2	Elongation factor Tu domain 2	Domain	Interproscan
PF04760	IF2_N	Translation initiation factor IF-2, N-terminal region	Domain	Interproscan
PF11987	IF-2	Translation-initiation factor 2	Domain	Interproscan
PF00009	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000178	Family	Translation initiation factor IF-2, bacterial-like	Interproscan
IPR009000	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR036925	Homologous_superfamily	Translation initiation factor IF-2, domain 3 superfamily	Interproscan
IPR004161	Domain	Translation elongation factor EFTu-like, domain 2	Interproscan
IPR006847	Domain	Translation initiation factor IF-2, N-terminal	Interproscan
IPR044145	Domain	Translation initiation factor IF-2, domain II	Interproscan
IPR015760	Family	Translation initiation factor IF- 2	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR023115	Domain	Translation initiation factor IF- 2, domain 3	Interproscan
IPR000795	Domain	Translational (tr)-type GTP-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43381	TRANSLATION INITIATION FACTOR IF-2-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003743	Molecular Function	translation initiation factor activity	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0006413	Biological Process	translational initiation	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02519	infB, MTIF2; translation initiation factor IF-2	-	Mitochondrial biogenesis	ko03029	deepkoala