Detailed information of ANN34479-RA in Montipora grisea

Genomic Location: Scaffold_4053__1_contigs__length_33520:5249...6814
NR annotation: WP_237381846.1, sigma-54 dependent transcriptional regulator [Sulfidibacter corallicola]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q04848DNA-binding transcriptional regulator NtrC OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571) OX=438753 GN=ntrC PE=3 SV=2
P77743Propionate catabolism operon regulatory protein OS=Escherichia coli (strain K12) OX=83333 GN=prpR PE=1 SV=1
P29267Hydrogenase transcriptional regulatory protein HoxA OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=hoxA PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0235022 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00158
all species →		Sigma54_activatSigma-54 interaction domainDomainInterproscan
PF02954
all species →		HTH_8Bacterial regulatory protein, Fis familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002078
all species →		DomainRNA polymerase sigma factor 54 interaction domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR025944
all species →		Conserved_siteSigma-54 interaction domain, conserved siteInterproscan
IPR002197
all species →		DomainDNA binding HTH domain, Fis-typeInterproscan
IPR003593
all species →		DomainAAA+ ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32071
all species →		TRANSCRIPTIONAL REGULATORY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008134
all species →		Molecular Functiontranscription factor bindingInterproscan
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN34479-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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