Detailed information of ANN34548-RA in Montipora grisea

Genomic Location: Scaffold_6018__1_contigs__length_28021:19361...21151
NR annotation: TIX91935.1, hypothetical protein BSK43_005875 [Rhizobium sp. P44RR-XXIV]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2W0P2Ribosomal RNA large subunit methyltransferase E OS=Paramagnetospirillum magneticum (strain ATCC 700264 / AMB-1) OX=342108 GN=rlmE PE=3 SV=1
Q2RXU5Ribosomal RNA large subunit methyltransferase E OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=rlmE PE=3 SV=1
Q0BT08Ribosomal RNA large subunit methyltransferase E OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) OX=391165 GN=rlmE PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007548 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02541
all species →		Ppx-GppAPpx/GppA phosphatase familyFamilyInterproscan
PF01728
all species →		FtsJFtsJ-like methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003695
all species →		DomainPpx/GppA phosphatase, N-terminalInterproscan
IPR002877
all species →		DomainRibosomal RNA methyltransferase, FtsJ domainInterproscan
IPR050082
all species →		FamilyRibosomal RNA large subunit methyltransferase RlmEInterproscan
IPR043129
all species →		Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR015507
all species →		FamilyRibosomal RNA large subunit methyltransferase EInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10920
all species →		RIBOSOMAL RNA METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008168
all species →		Molecular Functionmethyltransferase activityInterproscan
GO:0032259
all species →		Biological ProcessmethylationInterproscan
GO:0001510
all species →		Biological ProcessRNA methylationInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0008173
all species →		Molecular FunctionRNA methyltransferase activityInterproscan
GO:0008650
all species →		Molecular FunctionrRNA (uridine-2'-O-)-methyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN34548-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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