Gene detail

Detailed information of ANN34619-RA in Montipora grisea

Genomic Location: Scaffold_1849__1_contigs__length_48894:31111...34211
NR annotation: MCE2392600.1, IMP dehydrogenase [Pseudomonadota bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN34619-RA

ATGCAAGGGGCGTTTCGCATCCGCACGTTCGGCTGCCAGATGAACCGGCACGATGCCGAGAAGATGGAGAACCTGCTCCATCACGCCGGAATGCGCCCGGCCGCGGCGGAAGACGGGGCCGACTTGGTGCTGGTGCACACCTGCTCGATCCGCGAGAAAGCAGAGCACAAGCTCTACTCGGAGTTGGGCGCGCTGCTCAAGCGCAAGGCCGCCCGTCCGGGACTGGTCGTCGGGGTCGGCGGCTGCGTCGCGCAGCAAGAGGGCGAAGCGCTGCTGCGGCGCTTTCCCAAGCTCGACTTTGTCTTCGGTTCGCAGCACATCGTGGACCTGCCGGCGATGGTTGCCGCGGCCCGGCGCGACGAGCGGGAGTCGCGTGTGGACTGGGACGACGACCCCCAGCGGCGTTTCGAACTCCCCGAACGGCACCCGGAGTTCGCCTCGGCGACGCCGGGGCGGGCCTTCGTGACGGTCATGGAGGGCTGCGACCTGTTCTGCGCCTACTGCGTGGTGCCGCGCACCCGGGGCCGCGAGGTCAGCCGGCCGAGTGCGGCGATCCTCGAAGAAGTGCGCCGGCGCGCGGACGAGGGCGCGATCGAGGTGACGCTGCTCGGCCAGACAGTCAACGCCTATGGCCGGGCGCGACCGGGCCGGGCGCAAGGGGAGATCGACTTCGCGGAACTGGTGCGCCGAGTGGCCGGCGCGCCCGGCGTCGAACGGGTCCGCTTCACCAGCCCCCACCCGGCCTTTTTCGGCGACGCGCTGATCGCGGCTTACGCCGAAGTGCCCCAACTCTGTCCCCACGTCCCACCTGCCCGCGCAAAGCGGCTCCGACCGGGTGCTGCGCGCGATGAACCGCCGCTACACCGTCGCGGAGTTCCTCGGCGTCGTCGAGCGGCTCCGCGCCGCCCGCCCCGGCCTCGCGGTCACGACCGATCTGATCGTGGGCTTTCCGGGCGAGACGCGCGAGGATTTCGAGGCCACGCTCGACCTCGTGCGCCGGGCGGACTTCGTCGACGCCTTCTCGTTTCGGTATTCGGAGCGCCCGGGCACGCCCGCGCAGCGCCGGGGCTGGACACCTGCCGACGCGGGCGAGGTTCGAGAACGCCTCGAAGAACTCCAGGCGCTCCAGCGCGAGCGGACGCTGCGGGCACACCACCGCCGCGTCGGCGAGCGCACCGCCGTGCTCGTGGAAGGCCCGAGCGGCCGCGGGGCGGGCCAACTCCGGGGGCGCTGCCCGTACAACCGGGTGGTCTGCTTCACGGCCGAGGCTCCGCCCGCGCCCGGCGAGCTCGTGGACGTCGATATCTCGGCGGGCCTGCCGCACGCGCTCGTCGGGCGCGCCGCGACTCGAACGCACCGCGCTGCCACTCGTCTGAAGCGCGGCCCCGAAGCGCTCCCGAGCGCGGCGCCGAGCTCGAAGGCATAGGTTCGGCGGCCACTCGAGGAGGAGAGGGTGTGGCGCAGGCCCCCATTCGAGACGGCCTGACGTTCGACGACGTCCTCCTTGCGCCCGGCCCCTCTTCGGTGCACCCCTCGGCCGTTGGCCTGGCCACCCGGCTGACCCCCGAGGTGGAGTTGGCCATGCCGCTCGTCTCGTCGCCGATGGACACGGTTACCGAGCACCGCACGGCGATCTGCATGGCGCAAGAAGGCGGCATCGGATTCATCCACAAGAACATGCCCATTGCGGCGCAAGCCGCCGAAGTGGCGAAGGTCAAGCGCTTCGAGGCGGGGGTGATCGTCGATCCGATCACGCTGGCGCCGGACGAGGCGATCGGCGCCGCGCTCGAGACCATGAGCCGCCACGGGATCTCGGGGCTGCCCGTGGTCGGCGGCGAAAGGCTCGTCGGCATCGTCACCAACCGCGACTTGCGCTTCGTCAAGGACCTCGACCGGCCGGTCTCGTCGATCATGACCGGGCGCGAGCGCCTGATCACGGTGCGCTCCGGCGTCTCCTTGGAGCGGGCCAAGGACCTGCTCCACGCCAACCGGATCGAGAAGTTGCCGGTGGTGGACGAGCACGACGCGCTGCGCGGTTTGATCACGATCAAAGACATCGAGAAAGCCGAGCGCTACCCGTGGGCGAGCAAGGACGCGATGGAGCGGCTGCAGGTGGGCGCGGCGTTGGGCATCGGCCCCGACGTTTCCGAGCGCGCTCAAGCGCTGCTCGACGCGGGTGCGGACCTGCTGCTGCTCGACAGTTCGCACGGGCACGCCGAGGCAGTGCTGCGCGCGCTCGACAAGCTTTGCTCCTCGTTCCCCGGCGTCGAGGTCGTCGGGGGCAACGTGGCGACCCGGGAAGGCGCCGAGGCCCTGATCGAGTCCGGCGCTTCGGCGGTGCGCTGCGGCGTGGGGCCGGGTTCGATCTGCACGACCCGCGTGATCGCCGGCGTCGGCGTGCCGCAGCTCACCGCGGTGATGAACACCGCCGAGGTCTGCGCCCGGCGCGGCGTTCCGCTGATCGCCGACGGCGGAGTCAAGTACTCCGGCGACGTGGTCAAGGCGCTCGCGGCCGGGGCCGACAGCGTCATGCTCGGTTCACTGTTCGCGGGCACCGACGAGAGCCCGGGCGACTTGGTGTTGCACCAAGGCCGCTCCTTCAAGGTCTATCGCGGGATGGGGTCGCTGTCGGCCATGCGCGAGGGCTATCGGGATCGCTATTTCCAAGACGAGGCGGACGCGCCCTCGAAGCTCGTCCCCGAAGGCGTGGACGCGCGCGTGCCGCACCGGGGGCCGCTGACCCACAGCATCCACCAGTTGCTCGGCGGCGTCCGCGCGGGCATGGGTTTGGTCGGCGCGGGCGATTTGGCCGAGTTGCGCGCCCGCGCCCGCTTCCTGCGCGTCAGCGCCGCGGGTCTGCGCGAATCCCATCCGCACGACGTCATCATCACCGAAGAGCCCCCGAACTATTGGATGGAGAGCTAG

Transcript

ANN34619-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O67820	Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=guaB PE=3 SV=1
P44334	Inosine-5'-monophosphate dehydrogenase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=guaB PE=3 SV=1
Q0WD32	Inosine-5'-monophosphate dehydrogenase OS=Yersinia pestis OX=632 GN=guaB PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001934 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00478 all species →	IMPDH	IMP dehydrogenase / GMP reductase domain	Domain	Interproscan
PF04055 all species →	Radical_SAM	Radical SAM superfamily	Domain	Interproscan
PF00571 all species →	CBS	CBS domain	Domain	Interproscan
PF00919 all species →	UPF0004	Uncharacterized protein family UPF0004	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020612 all species →	Conserved_site	Methylthiotransferase, conserved site	Interproscan
IPR001093 all species →	Domain	IMP dehydrogenase/GMP reductase	Interproscan
IPR007197 all species →	Domain	Radical SAM	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR005990 all species →	Family	Inosine-5'-monophosphate dehydrogenase	Interproscan
IPR000644 all species →	Domain	CBS domain	Interproscan
IPR038135 all species →	Homologous_superfamily	Methylthiotransferase, N-terminal domain superfamily	Interproscan
IPR013848 all species →	Domain	Methylthiotransferase, N-terminal	Interproscan
IPR046342 all species →	Homologous_superfamily	CBS domain superfamily	Interproscan
IPR023404 all species →	Homologous_superfamily	Radical SAM, alpha/beta horseshoe	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11911 all species →	INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051539 all species →	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0003938 all species →	Molecular Function	IMP dehydrogenase activity	Interproscan
GO:0006164 all species →	Biological Process	purine nucleotide biosynthetic process	Interproscan
GO:0006183 all species →	Biological Process	GTP biosynthetic process	Interproscan
GO:0035596 all species →	Molecular Function	methylthiotransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00088	IMPDH, guaB; IMP dehydrogenase	EC:1.1.1.205	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.