Detailed information of ANN34633-RA in Leptoseris scabra

Genomic Location: Scaffold_26__1_contigs__length_875824:359232...360420
NR annotation: PFX31792.1, Pogo transposable element with KRAB domain [Stylophora pistillata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000155 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09607
all species →		BrkDBDBrinker DNA-binding domainDomainInterproscan
PF03184
all species →		DDE_1DDE superfamily endonucleaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018586
all species →		DomainBrinker DNA-binding domainInterproscan
IPR004875
all species →		DomainDDE superfamily endonuclease domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050863
all species →		FamilyCentromere and Transposable Element-Derived ProteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303
all species →		TRANSPOSONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN34633-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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