Gene detail

Detailed information of ANN34751-RA in Montipora grisea

Genomic Location: Scaffold_1675__1_contigs__length_51350:22849...27367
NR annotation: MYA03617.1, ABC transporter ATP-binding protein [Caldilineaceae bacterium SB0664_bin_22]
Species abbreviation MGRIS · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN34751-RA

ATGCTGCAGGCGGGGGCACCGCCGGCACCGGAGACCGCCGCAGAGGCCGTTGCGGAGGCCGATGAGTCGGCCACCGCCGCATCCGGGCGCGTGCTGCCGCGCCTGTTCGCACTGCTGCCGGCCGGCAAGTACTGGCGCGTACCGGTCATTGCCCTGGCCCTCGCCGCGAGCACCGGCGCCGCGGTCCTCTCACCGCTGCTGGCGGGGCAGTTCCTGTTCGACGAAGTGCTGGCCCCGGAAGGGCGCTTCGCCGGTCGCCTGCTGCTGGCGGCAGGCCTGATCCTGCTGGCGCGGGTCGCCGAAGTGGGGTTCCGGGTCACCTCGGGGTGGACCAACGCCGCCTTCATCCACGATCTGGAGGTCACCCTCAAGCGCACCGCGTTCGGGTCGCTGCAGCGCCTCTCCCTGCGCTTCTTCAGCGGCCGTCACAGCGGTGAACTGATGACGCGGCTGGAGCAGGACGCCTCCGACATCGCGCTCCTGTTCCACATGATCGCACCATCCGCGCTCACCGGCGGCCTGTTCCTGGCCGGCTCGCTGATCGCCATGCTGCTGCTCGACTGGCAGCTCGCCCTGGCCGCCGTCCTCCCCTTCCCCCTGCTGTTCATGGTGTTTCGGCGCATCATTCCCGAGGTCAACTCCTGCTTCGAACGCATGTTCCGTGCCGAGGCGGAGCTGCGCACCGTCACCAGCGATTCCCTCACGGGAGCTCGGGTGGTGCGCGCCTTCGGCCAGCAGCAGCGTGAGCTGCAGCGCTTTGCGGGGCCTAATCGAGAGGCGGCGCGGCTCGGCTATCTGGCGGACGTCATGGTGGGTACGGCCCGTCCGCCGACCCAGCTGGTGACCGAACTGGTGCTGGTGGGGGTGTGGGCGGCGGGCGCCTGGGCGGTGGCGCGCGATCAGGTGACGGTGGGGGTGCTGGTGACCTTTGCCGGCTACCTGGCGCGCTTCTTCTGGCCCGTCGGGGGGCTGGTGGAACTGGCCCAGGACTGGGGCCGCGTCGCCACCGCGGCACGGCGGTTGCTGGCTCTGATCGACGCACCGCCCGATCTGCCGCACCCGCGGCGGGCGCGGCGCGGCTCCCGCCTGCGGGGCAGCGTCGCCCTGGAGCGGGTGTCGTTCGGCTACGCTCCCGGGCAGCCGGCACTGCGCGAGGTGAGTCTGCACGCCGCGGCCGGCGAAATGATCGGCCTGGTGGGCCACACCGGCGCCGGCAAATCGACGGTGATCAACCTGCTGGCGCGGCTGTACGACGCGGACGAGGGGGTGGTGCGCCTCGATGGCGCCGACGTCCGCTCCTTCGCCGCGGCCGATCTGAATGGCCAGATCGGGATCGTACTGCAGGATACCTACCTGTTCCTGGGTAGTGTGGCGGCCAACATCGGCTACGCCAGACCCGACGCCGATCGCGAGCAGATCGTCGCCGCCGCCATGGCCGCCAATGCCCACAACTTCATCGTCGATCTCCCCGATGGTTACGACACCGAACTGGGCCCCGGTGGCTACGGGCTGTCCGGCGGCCAGCGGCAACGCCTCGCCATCGCCCGCGCTCTGTTGCTGGACCCGCCGATCCTGCTGATGGACGAGGCCACCTCGAGCGTGGACACCGAGACCGAACTGCGCATTCAGGCCGCCATCGAGCGCGTGGTGCAGGGCCGCACGGTGGTCGTGATCGCCCATCGGCTGTCCACCCTGCGGCTGGCCTCGCGGCTCTACGTGCTGGATGGCGGCCGGATCGTGGAGAGCGGCCCGCACGCGCGCCTGATCCACGACGGCGGGTTCTATCAGCGGCTCGTGGAGCGCCAGCGGGAGGCGCTCCAGCCGCGAACCGGTGGACTTCTACCGCGCGTTCCCATTCTCGGCACCGGACGACCTGATCGCTGTGCGCGACGGCACCGGCACCGAGCTGGGGATCCTGCCCCCCCTCGAGACCTTCCCCGAAACCGAGCGGCGGCTGATCCGCGAGGAGCTGCAGCGCCGCTACTTCGCCCGGATCACCGTCGTCATGAAGCTGGAGGAGCGCTTCGGACAGTCGCACTGGCTGGTCGATACGGAAGCGGGACAGACCCGCTTCACGGTGCAGAACGAACACGCCAGCCTGCGCGACCTCCCCGACGGGACCCTGCTGCTCATCGACGTGCACGGCAACCGCTACCAGCTGGCGCCGCGCGCCGAGCTGGAGCCGCGGCTGCGCCGCAAACTGGAGGCGATGTTCTGACGCCGCCGCCGGCAGTAGCGGCCGTGGTGGCGGCGGCCGCTCCGGGCGAGACCCCGCTGCACTACGCGCCGGCGGACCTCGATGCCCGGGCCCGCTACCAGGACGGTCACCTGGTAGTCACCGAACGGAGCGTGTTCACCATTTCCGGCGAGCGCATCGCGCTGCGTAACGCCCGCACCCCGGAAGACCACTTCGCCGCCCACGTGATGAGCGGCTCGGGTGTGTTTCTCGTCAGCGCCGGCGCATCGGGGAGCCGCGCCCTCGCCTACTTCACCCGCCGCCATGCCGCCACCTATCTGCGGCTCGCCGCCGCCCTGGGTGCCGCGCCACCGGTCACCGGCCCGGAGCGGGATGCCGCGCCCGGCGCCGGCCCGGGCACGCAGCAACGAGGCGGCTTCGCCCGCGACTGGGTGGCGGAGCCGCTGCGCAACCCGCGCGGGGTCCTGGTACGGCTGCTGTCGTTCCTCCGGCCCCATCGCGGGACCATGCTGCTCACCCTGCTGCTGTTCATCGCCGCCAATCTGCTCACCCTGCTGATCCCGCAGCTCACCCGCCTGCTGATCGACGACTGGCTGGTGCCACGCACCATCGCACCGGGGCCGGTGGCCCTGCTGCTCGCCGCCATGGCCGGCACCTACCTGCTGAGCGCCGCCATCCAGGTGCTCCGCAACCGCGGCGTGGCACGTCTCAGCGCCGGGCTGGTATACGACCTCAGAAGCGCCGTCTACGCCAGCGTGCAGAACATGTCGCTGCGCTTCATCGCCACCAAGCCGCCGGGTGACGTACTCAATCGCGTCGCTACCGACACCACCAACCTGCGCCGCTTTCTGCAGAGCTGGGGCACCGACGGCGTCAGCCAGGTGCTGCTGTTCGTGCTGTTGTGCGCCGTTGCGTTCGCCCAGAACTGGCTGCTGGCGCTGCTCACCATCGCCACCGTTCCCCTGGCGGCGCTGCTGGCCATGGCCGTGTGGCGGCTGGTGCGCTGGCTGGAACGCACCCATCACCGGCTGCACGACAAGATCGGCACCTTCGTCCACGACGTGCTGGCCGGCATCCGCGTGGTCAAGGCGTTCCGCCGCGAAGATGCGGAGATCGCCCGCTACCGGTACTGGACCGCGCGCAAGTACGTGATCGACGTGCGCAACCAGAAGATCTGGCGCGTCATGGGACCGCTCGTGGAGTTCTCCACGCGCTTGGGCGAACTGCTGGTGTTCCTGGTCGGCGGCGCTCTGGTCCTGAGGGGCGAGTTGAGCGTCGGCGAACTGGTGCAGTTCGCCGCCTACGTGGTGCTGCTGGTGGAGCCGTTGGCGTGGGCCGGCGAGGTGCCGCAGCGGCTGGTGGAGGCCCTGACCTCCGCCGAGCGGATCTTCGAAGCGATCGACCAGGAGCCGGAAATTACCGTCGCCCGCCGGCCCGTCAGCCGCGATCTGCGCGGTGAGGTGGAATTCGCGGCGGTGGATTTCGCCTACCGTGCGGGGGAGCCGGTGCTGCAGGGGTTTTCTCTGCACATCGGCGCCGGCGAGATGGTGGGACTGGTGGGGGCCTCTGGCGCCGGCAAGTCCACCGTGATCAACCTGCTGCTGCGGCTCTACGACGTGGACGGCGGACGCATCACCCTGGACGGCACCGATATCCGCCGCCTGGAGCCGGCGGCGCTGCGACGGCAGGTGGGGGTGGTACTGCAGGATCCCTTCCTGTTTTCCGGTACCGTGGCGGACAATATCCGCTATGCGAAACCCGACGCGAGTGACGGGGTGGTGGTGCAGGCGGCGCGCATCGCCCAGGCGTACGACTTCGTGATGGGGTTCCCGGACGGCTTCGACACCGTGGTCGGGGAGCGCGGGCAGCGCCTGTCGGGCGGGGAGCGCCAGCGCATCTCCATCGCCCGCGCCATCCTGCACGATCCCCGCATCCTGATCCTGGACGAGGCCACCTCGGCCCTCGATCTGGAGACCGAGGAGCGCATTCACGCCGCCCTGGCTGCCCTCACCGAGGGTCGTACCGTGATCGCCATCGCCCACCGTCTGGTCACCCTGAGCCGCGCCTGGCGCCTGGCGGTGATGGAGGCGGGACGCATCGAGGAGCTGGGAACCCACCGCCAGTTGCTGGCCGCGGGTGGCCGCTACCGGCGCATGGTGGAGGCGCAACGCGCCCTGGCCGACGCCCAGACCCTGAGCCACGCCTGA

Transcript

ANN34751-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6YUU5	Putative multidrug resistance protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0190300 PE=3 SV=1
O31708	Uncharacterized ABC transporter ATP-binding protein YknV OS=Bacillus subtilis (strain 168) OX=224308 GN=yknV PE=3 SV=1
Q9WYC4	Uncharacterized ABC transporter ATP-binding protein TM_0288 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0288 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0233586 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan
PF00664 all species →	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039421 all species →	Family	Type 1 protein exporter	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036640 all species →	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR011527 all species →	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR017871 all species →	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24221 all species →	ATP-BINDING CASSETTE SUB-FAMILY B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0140359 all species →	Molecular Function	ABC-type transporter activity	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06147	ABCB-BAC; ATP-binding cassette, subfamily B, bacterial	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.