Gene detail

Detailed information of ANN34762-RA in Montipora grisea

Genomic Location: Scaffold_8191__1_contigs__length_23172:21893...22291
NR annotation: MXW89379.1, 30S ribosomal protein S11 [Acidimicrobiaceae bacterium]
Species abbreviation MGRIS · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2JFF0	Small ribosomal subunit protein uS11 OS=Frankia casuarinae (strain DSM 45818 / CECT 9043 / HFP020203 / CcI3) OX=106370 GN=rpsK PE=3 SV=1
A8LB07	Small ribosomal subunit protein uS11 OS=Parafrankia sp. (strain EAN1pec) OX=298653 GN=rpsK PE=3 SV=1
Q0RRP5	Small ribosomal subunit protein uS11 OS=Frankia alni (strain DSM 45986 / CECT 9034 / ACN14a) OX=326424 GN=rpsK PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005576 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00411 all species →	Ribosomal_S11	Ribosomal protein S11	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036967 all species →	Homologous_superfamily	Small ribosomal subunit protein uS11 superfamily	Interproscan
IPR001971 all species →	Family	Small ribosomal subunit protein uS11	Interproscan
IPR019981 all species →	Family	Small ribosomal subunit protein uS11, bacterial-type	Interproscan
IPR018102 all species →	Conserved_site	Small ribosomal subunit protein uS11, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11759 all species →	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0022627 all species →	Cellular Component	cytosolic small ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02948	RP-S11, MRPS11, rpsK; small subunit ribosomal protein S11	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.