Detailed information of ANN34814-RA in Leptoseris scabra

Genomic Location: Scaffold_23__1_contigs__length_1477905:168531...174979
NR annotation: CAH3179369.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q54HH8Small nuclear ribonucleoprotein Sm D-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0289453 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007761 (this species only)

 Pfam domain
No Pfam domain signature was detected for ANN34814-RA. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR039267
all species →		FamilyU7 snRNA-associated Sm-like protein Lsm11Interproscan
IPR010920
all species →		Homologous_superfamilyLSM domain superfamilyInterproscan
IPR034109
all species →		DomainSm-like protein Lsm11, middle domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21415
all species →		U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM11Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005683
all species →		Cellular ComponentU7 snRNPInterproscan
GO:0006398
all species →		Biological ProcessmRNA 3'-end processing by stem-loop binding and cleavageInterproscan
GO:0071209
all species →		Molecular FunctionU7 snRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN34814-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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