Detailed information of ANN34853-RA in Leptoseris scabra

Genomic Location: Scaffold_31__1_contigs__length_553005:539815...544013
NR annotation: XP_044175008.1, thioredoxin-like protein 4B [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NX01Thioredoxin-like protein 4B OS=Homo sapiens OX=9606 GN=TXNL4B PE=1 SV=1
Q8BUH1Thioredoxin-like protein 4B OS=Mus musculus OX=10090 GN=Txnl4b PE=2 SV=2
Q9FE62Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana OX=3702 GN=YLS8 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001390 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02966
all species →		DIM1Mitosis protein DIM1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004123
all species →		FamilyDim1 familyInterproscan
IPR036249
all species →		Homologous_superfamilyThioredoxin-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12052
all species →		THIOREDOXIN-LIKE PROTEN 4A, 4BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0046540
all species →		Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0005681
all species →		Cellular Componentspliceosomal complexInterproscan
GO:0005682
all species →		Cellular ComponentU5 snRNPInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN34853-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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