Detailed information of ANN34925-RA in Montipora grisea

Genomic Location: Scaffold_8576__1_contigs__length_22197:8218...8883
NR annotation: WP_045441758.1, ribulose-phosphate 3-epimerase [Tepidicaulis marinus]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O34557Ribulose-phosphate 3-epimerase OS=Bacillus subtilis (strain 168) OX=224308 GN=rpe PE=3 SV=1
P40117Ribulose-phosphate 3-epimerase 1 OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=rpe1 PE=3 SV=1
Q04539Ribulose-phosphate 3-epimerase 2 OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=rpe2 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002999 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00834
all species →		Ribul_P_3_epimRibulose-phosphate 3 epimerase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000056
all species →		FamilyRibulose-phosphate 3-epimerase-likeInterproscan
IPR026019
all species →		FamilyRibulose-phosphate 3-epimeraseInterproscan
IPR011060
all species →		Homologous_superfamilyRibulose-phosphate binding barrelInterproscan
IPR013785
all species →		Homologous_superfamilyAldolase-type TIM barrelInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11749
all species →		RIBULOSE-5-PHOSPHATE-3-EPIMERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0016857
all species →		Molecular Functionracemase and epimerase activity, acting on carbohydrates and derivativesInterproscan
GO:0004750
all species →		Molecular FunctionD-ribulose-phosphate 3-epimerase activityInterproscan
GO:0006098
all species →		Biological Processpentose-phosphate shuntInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0009052
all species →		Biological Processpentose-phosphate shunt, non-oxidative branchInterproscan
GO:0044262
all species →		Biological Processobsolete cellular carbohydrate metabolic processInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01783rpe, RPE; ribulose-phosphate 3-epimeraseEC:5.1.3.1
Carbon fixation in photosynthetic organismsko00710deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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