Genomic Location: Scaffold_8576__1_contigs__length_22197:8218...8883
NR annotation: WP_045441758.1, ribulose-phosphate 3-epimerase [Tepidicaulis marinus]
| CDS | |||||
| ANN34925-RA | |||||
| Transcript |
| ANN34925-RA |
| Protein |
| ANN34925-RA |
| Uniprot term | Description |
|---|---|
| O34557 | Ribulose-phosphate 3-epimerase OS=Bacillus subtilis (strain 168) OX=224308 GN=rpe PE=3 SV=1 |
| P40117 | Ribulose-phosphate 3-epimerase 1 OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=rpe1 PE=3 SV=1 |
| Q04539 | Ribulose-phosphate 3-epimerase 2 OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=rpe2 PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00834 | Ribul_P_3_epim | Ribulose-phosphate 3 epimerase family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000056 | Family | Ribulose-phosphate 3-epimerase-like | Interproscan |
| IPR026019 | Family | Ribulose-phosphate 3-epimerase | Interproscan |
| IPR011060 | Homologous_superfamily | Ribulose-phosphate binding barrel | Interproscan |
| IPR013785 | Homologous_superfamily | Aldolase-type TIM barrel | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11749 | RIBULOSE-5-PHOSPHATE-3-EPIMERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005975 | Biological Process | carbohydrate metabolic process | Interproscan |
| GO:0016857 | Molecular Function | racemase and epimerase activity, acting on carbohydrates and derivatives | Interproscan |
| GO:0004750 | Molecular Function | D-ribulose-phosphate 3-epimerase activity | Interproscan |
| GO:0006098 | Biological Process | pentose-phosphate shunt | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0009052 | Biological Process | pentose-phosphate shunt, non-oxidative branch | Interproscan |
| GO:0044262 | Biological Process | obsolete cellular carbohydrate metabolic process | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K01783 | rpe, RPE; ribulose-phosphate 3-epimerase | EC:5.1.3.1 | Carbon fixation in photosynthetic organisms | ko00710 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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