Detailed information of ANN34969-RA in Leptoseris scabra

Genomic Location: Scaffold_40__1_contigs__length_121784:28123...28800
NR annotation: NVK40546.1, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase [Oceanospirillaceae bacterium]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2SMB31-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=hisA PE=3 SV=1
A1U5H61-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=hisA PE=3 SV=1
B3PGA31-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=hisA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0023241 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00977
all species →		His_biosynthHistidine biosynthesis proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006062
all species →		FamilyHistidine biosynthesis proteinInterproscan
IPR013785
all species →		Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR011060
all species →		Homologous_superfamilyRibulose-phosphate binding barrelInterproscan
IPR023016
all species →		FamilyHisA/PriA, bacterial-typeInterproscan
IPR044524
all species →		FamilyHistidine biosynthesis, HisA-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43090
all species →		1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000105
all species →		Biological ProcessL-histidine biosynthetic processInterproscan
GO:0003949
all species →		Molecular Function1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activityInterproscan
GO:0000162
all species →		Biological Processtryptophan biosynthetic processInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01814hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomeraseEC:5.3.1.16
Histidine metabolismko00340deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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