Gene detail

Detailed information of ANN34973-RA in Leptoseris scabra

Genomic Location: Scaffold_40__1_contigs__length_121784:54800...56631
NR annotation: MBV1876945.1, HAMP domain-containing protein [Pseudomonadales bacterium]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q06067	Signal transduction histidine-protein kinase AtoS OS=Escherichia coli (strain K12) OX=83333 GN=atoS PE=1 SV=1
O31661	Sporulation kinase E OS=Bacillus subtilis (strain 168) OX=224308 GN=kinE PE=1 SV=1
P14377	Sensor histidine kinase ZraS OS=Escherichia coli (strain K12) OX=83333 GN=zraS PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011783 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02518 all species →	HATPase_c	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan
PF00672 all species →	HAMP	HAMP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005467 all species →	Domain	Histidine kinase domain	Interproscan
IPR003594 all species →	Domain	Histidine kinase/HSP90-like ATPase	Interproscan
IPR036890 all species →	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR003660 all species →	Domain	HAMP domain	Interproscan
IPR036097 all species →	Homologous_superfamily	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	Interproscan
IPR004358 all species →	Domain	Signal transduction histidine kinase-related protein, C-terminal	Interproscan
IPR003661 all species →	Domain	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43065 all species →	SENSOR HISTIDINE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0000155 all species →	Molecular Function	phosphorelay sensor kinase activity	Interproscan
GO:0016310 all species →	Biological Process	phosphorylation	Interproscan
GO:0016772 all species →	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02482	flgS; two-component system, NtrC family, sensor kinase	EC:2.7.13.3	Two-component system	ko02022	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.