Gene detail

Detailed information of ANN34991-RA in Leptoseris scabra

Genomic Location: Scaffold_115__1_contigs__length_55808:26113...29262
NR annotation: CAE7932356.1, carB [Symbiodinium necroappetens]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN34991-RA

ATGGGTAAAATTATTGGGATTGACTTGGGTACCACCAACTCCTGCGTGGCCATTATGGAAGGTGACAAGCCTAAGGTTATTGAAAATAAAGAAGGCGATCGTACCACGCCTTCTATTATCGCTTACGCAGATGAAGGTGAAATTTTAGTAGGTCAGCCCGCAAAACGTCAGGCTGTTACTAATCCCGACAATACCTTGTTCGCGGTAAAACGTTTGATTGGTCGTCGTTTTAAAGACAAGGTTGTGCAAAAAGATATCTCAATGGTGCCCTACAAGATCGTTGAAGCCGATAATGCGTCAGGCAACGAAAGATGCGGGTCGTATTGCTGGCTTTTAGATGTGAAGCGTATTATTAACGAGCCAACAGCAGCGTCCTTGGCCTATGGACTTGATAAACAGCGCGGTGACTCTGTTATTGCCGTTTATGACTTAGGTGGTGGTACTTTCGATATTTCCATCATCGAAATTGCTGAAGTTGATGGCGAGCATCAATTCGAAGTACTCGCCACTAATGGTGATACTTTCCTCGGCGGTGAAGATTTTGACCTTAAACTGATCGATTTCCTCGCGGACGAGTTTAAGAAAGAGTCGGGCATTGACCTGCACAATGACCCTCTAGCCTTGCAGCGTCTTAAAGAGGCTGCTGAAAAAGCTAAGATCGAGCTCTCTAGCGCACAGCAAACAGATGTCAATCTACCTTACATCACAGCTGACGCCAGTGGTCCTAAGCATTTGAGTGTTAAGGTGACTCGCGCCAAACTTGAATCTCTAGTGGAAGATTTGGTTGAGCGTACACTAGCGCCCTTAAAGCAAGCCTTAGAAGATGCTGATTTGAGCATTAGTGATATCAATGACGTCATTCTTGTTGGTGGCCAAACACGTATGCCACTCGTTCAAGAAAAGGTGAAAAACTTCTTTGGCAAAGAAGCGCGTAAAGACGTTAACCCAGATGAGGCTGTGGCTGTTGGTGCGGCGATTCAGGCGGGTGTTCTTTCAGGTGATGTGAAAGATGTACTCTTGCTAGACGTTACTCCTCTGTCCCTCGGTATTGAAACGATGGGCGGTGTAATGACACCTTTGATTGATAAAAACACCACGATTCCAACTAAGAAAACTCAAGTGTTTTCGACAGCGGAAGACAATCAATCTGCCGTAACTATTCATGTATTGCAAGGTGAGCGTAAGCAGGCAGGACAAAACAAATCTTTAGGCCGTTTTGATTTGTCGGATATTCCACCAGCACCTCGTGGTATGCCACAAATCGAAGTTGCTTTCGATTTGGATGCTAATGGTATCCTTAACGTATCTGCAAAAGATAAAGCCACAGGTAAAGAGCAATCGATCGTCATTAAAGCCTCTAGTGGTCTTTCTGATGATGAAATCGAGCGTATGGTTAAAGATGCCGAAGCTAACGCCGATGAAGATCGTAAGTTCGAAGAGCTTGTTAGCGCGCGTAACTCTGCTGATGGTTTGATCCATGCGACTCAGAAAACCTTGACAGAAGCAGGCGAAAAAGTCACCGCTGAAGAAAAAGAAAGCATTGAGAAAGCTATTGCTGATTTAGAAGCTGTGTTGAAATCTGACGATAAGGATGCGATTGTTGAGAAAACTAACGCATTGACTGAAGCTTCTTCTTCGCTCGCTCAGCGTATGTATGCTGAACAAGCTGAGCAAGCAAAAACAGCTGATCCAGGCGCGGCAGGTGCTGCTGGAGCCGGAAGCGCGGACGGCGATGGGTTTAACGCCATGTCGAAAAAAGATTATTACGAAGTTCTCGGTGTTTCTCGCGAGGCGGATGAGAAGGAAATTAAAAAAGCCTATCGTCGTCTAGCGATGAAATATCACCCCGATCGTAACCAGGGTGATACAGAAACAGAAGAGCTTTTCAAGGAGGCTAGTGAAGCCTACGAAATACTCTCTGATGCTGAAAAGCGCGCCGCTTATGATCAATATGGTCATGCTGGCGTTGATCCTAACAGTGCTGGTGGTTTTCGTGGTGGTTCCAGCTTTTCTGATATTTTCGGCGATGTGTTTGGTGATATTTTTGGTGGTGGTCGCGGCGGCGGTGGTCAACAGCAACGTGGCTCAGACCTGCGATATACCCTAGAAATTGATCTTGAAGAGGCTGTGCGTGGTACCGAAGTTAAGATTCGTGTTCCTACTCAGGTCAGCTGTAAAGTCTGTTCAGGTTCTGGCGCTAAGCCGGGCAGTAAGCCTTCAACTTGCCCGACCTGTAATGGGGCTGGCCAGATTCGCATGCAGCAAGGTTTTTTCGCTGTTCAGCAAACCTGCCCTCGCTGCCATGGGCGTGGCCAAATTATTAGTGATCCATGCAATGCTTGCCATGGAGCAGGCCGCGTTGAAGAGACAAAAACGCTCTCAGTTAAGATTCCACCAGGGGTTGATACAGGGGATCGCATTCGCTTAAGCGGTGAAGGTGAGGCTGCTGCGCATGGTGGTGTTGCTGGCGATCTGTATGTTCAGGTCTCTGTTCGTGAGCATAAAATCTTTGCCCGTGATGGCAATAATCTTTACTGTGAAGTTCCTATAAGTTTCCCTGATGCTGTTCTTGGTGGTGAGCTAGAAGTACCCACACTAGATGGACGTGTGAAGCTTAAAATCCCTGCTGAAACTCAGACTGGCCGTTTGTTCCGTCTAAGAGGTAAAGGTGTCACTCCCGTGCGTGGAGGGTCTCCAGGGGATCTCATGTGCCGTGTTGTCATAGAGACGCCTGTGAGTTTAAACAAAAAACAAAAAGACTTGCTCAAACAACTGCAGCAGAGTCTTGAAGAAGGTGATAGTAAACATTCTCCAAGAAAGAACTCATGGTTTGCAGGCGTGAAAAGTTTTTTTGAAGACATGTAG

Transcript

ANN34991-RA

Protein

Uniprot

Uniprot term	Description
A6W2D2	Chaperone protein DnaK OS=Marinomonas sp. (strain MWYL1) OX=400668 GN=dnaK PE=3 SV=1
C5BQ33	Chaperone protein DnaK OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) OX=377629 GN=dnaK PE=3 SV=1
Q02FR1	Chaperone protein DnaK OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=dnaK PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01556	DnaJ_C	DnaJ C terminal domain	Domain	Interproscan
PF00226	DnaJ	DnaJ domain	Domain	Interproscan
PF00684	DnaJ_CXXCXGXG	DnaJ central domain	Domain	Interproscan
PF00012	HSP70	Hsp70 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001305	Domain	Heat shock protein DnaJ, cysteine-rich domain	Interproscan
IPR002939	Domain	Chaperone DnaJ, C-terminal	Interproscan
IPR001623	Domain	DnaJ domain	Interproscan
IPR036410	Homologous_superfamily	Heat shock protein DnaJ, cysteine-rich domain superfamily	Interproscan
IPR018253	Conserved_site	DnaJ domain, conserved site	Interproscan
IPR012724	Family	Chaperone DnaJ	Interproscan
IPR036869	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR018181	Conserved_site	Heat shock protein 70, conserved site	Interproscan
IPR029048	Homologous_superfamily	Heat shock protein 70kD, C-terminal domain superfamily	Interproscan
IPR008971	Homologous_superfamily	HSP40/DnaJ peptide-binding	Interproscan
IPR029047	Homologous_superfamily	Heat shock protein 70kD, peptide-binding domain superfamily	Interproscan
IPR043129	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan
IPR013126	Family	Heat shock protein 70 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19375	HEAT SHOCK PROTEIN 70KDA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0031072	Molecular Function	heat shock protein binding	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0009408	Biological Process	response to heat	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04043	dnaK, HSPA9; molecular chaperone DnaK	-	Exosome	ko04147	deepkoala