Detailed information of ANN35008-RA in Leptoseris scabra

Genomic Location: Scaffold_95__1_contigs__length_60704:19413...21663
NR annotation: WP_237443037.1, O-succinylhomoserine sulfhydrylase [Sinobacterium norvegicum]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P55218O-succinylhomoserine sulfhydrylase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=metZ PE=1 SV=1
Q8L0X4L-methionine gamma-lyase OS=Fusobacterium nucleatum subsp. polymorphum OX=76857 GN=mgl PE=1 SV=1
P9WGB4O-succinylhomoserine sulfhydrylase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=metZ PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011653 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17863
all species →
AAA_lid_2AAA lid domainDomainInterproscan
PF07726
all species →
AAA_3ATPase family associated with various cellular activities (AAA)DomainInterproscan
PF01053
all species →
Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzymeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041628
all species →
DomainChlI/MoxR, AAA lid domainInterproscan
IPR011703
all species →
DomainATPase, AAA-3Interproscan
IPR000277
all species →
FamilyCys/Met metabolism, pyridoxal phosphate-dependent enzymeInterproscan
IPR015421
all species →
Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015424
all species →
Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015422
all species →
Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11808
all species →
TRANS-SULFURATION ENZYME FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0016887
all species →
Molecular FunctionATP hydrolysis activityInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0016846
all species →
Molecular Functioncarbon-sulfur lyase activityInterproscan
GO:0019346
all species →
Biological ProcesstranssulfurationInterproscan
GO:0030170
all species →
Molecular Functionpyridoxal phosphate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN35008-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP