Detailed information of ANN35014-RA in Leptoseris scabra

Genomic Location: Scaffold_95__1_contigs__length_60704:36443...37670
NR annotation: HGX94054.1, 3-isopropylmalate dehydratase large subunit [Candidatus Tenderia sp.]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2SJD83-isopropylmalate dehydratase large subunit OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=leuC PE=3 SV=1
Q3BPJ63-isopropylmalate dehydratase large subunit OS=Xanthomonas euvesicatoria pv. vesicatoria (strain 85-10) OX=316273 GN=leuC PE=3 SV=1
A4XVW23-isopropylmalate dehydratase large subunit OS=Ectopseudomonas mendocina (strain ymp) OX=399739 GN=leuC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0013548 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00330
all species →		AconitaseAconitase family (aconitate hydratase)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001030
all species →		DomainAconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domainInterproscan
IPR050067
all species →		FamilyIsopropylmalate dehydratase and related enzymesInterproscan
IPR015931
all species →		Homologous_superfamilyAconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3Interproscan
IPR004430
all species →		Family3-isopropylmalate dehydratase, large subunitInterproscan
IPR036008
all species →		Homologous_superfamilyAconitase, iron-sulfur domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43822
all species →		HOMOACONITASE, MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003861
all species →		Molecular Function3-isopropylmalate dehydratase activityInterproscan
GO:0009098
all species →		Biological ProcessL-leucine biosynthetic processInterproscan
GO:0051539
all species →		Molecular Function4 iron, 4 sulfur cluster bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN35014-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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