Detailed information of ANN35016-RA in Leptoseris scabra

Genomic Location: Scaffold_375__1_contigs__length_39359:21357...21886
NR annotation: KAJ6650396.1, hypothetical protein lerEdw1_010114, partial [Lerista edwardsae]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7Z4L5Tetratricopeptide repeat protein 21B OS=Homo sapiens OX=9606 GN=TTC21B PE=1 SV=2
Q0HA38Tetratricopeptide repeat protein 21B OS=Mus musculus OX=10090 GN=Ttc21b PE=1 SV=1
Q8C0S4Tetratricopeptide repeat protein 21A OS=Mus musculus OX=10090 GN=Ttc21a PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002982 (this species only)

 Pfam domain
No Pfam domain signature was detected for ANN35016-RA. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR040364
all species →		FamilyTetratricopeptide repeat protein 21A/21BInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14699
all species →		STI2 PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0030991
all species →		Cellular Componentintraciliary transport particle AInterproscan
GO:0035721
all species →		Biological Processintraciliary retrograde transportInterproscan
GO:0061512
all species →		Biological Processprotein localization to ciliumInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN35016-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP