Detailed information of ANN35018-RA in Leptoseris scabra

Genomic Location: Scaffold_375__1_contigs__length_39359:30969...34262
NR annotation: CAH1774388.1, unnamed protein product [Owenia fusiformis]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7Z4L5Tetratricopeptide repeat protein 21B OS=Homo sapiens OX=9606 GN=TTC21B PE=1 SV=2
Q0HA38Tetratricopeptide repeat protein 21B OS=Mus musculus OX=10090 GN=Ttc21b PE=1 SV=1
Q6INC1Tetratricopeptide repeat protein 21B OS=Xenopus laevis OX=8355 GN=ttc21b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002982 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13432
all species →
TPR_16Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR040364
all species →
FamilyTetratricopeptide repeat protein 21A/21BInterproscan
IPR019734
all species →
RepeatTetratricopeptide repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14699
all species →
STI2 PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0030991
all species →
Cellular Componentintraciliary transport particle AInterproscan
GO:0035721
all species →
Biological Processintraciliary retrograde transportInterproscan
GO:0061512
all species →
Biological Processprotein localization to ciliumInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN35018-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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