Detailed information of ANN35023-RA in Leptoseris scabra

Genomic Location: Scaffold_54__1_contigs__length_82578:63205...64485
NR annotation: WP_189389269.1, citrate synthase [Bacterioplanes sanyensis]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P14165Citrate synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=gltA PE=1 SV=2
O68883Citrate synthase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=gltA PE=3 SV=1
P0ABH8Citrate synthase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=gltA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004333 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00285
all species →		Citrate_syntCitrate synthase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024176
all species →		FamilyCitrate synthase, bacterial-typeInterproscan
IPR010953
all species →		FamilyCitrate synthase, type IInterproscan
IPR036969
all species →		Homologous_superfamilyCitrate synthase superfamilyInterproscan
IPR019810
all species →		Active_siteCitrate synthase active siteInterproscan
IPR002020
all species →		FamilyCitrate synthaseInterproscan
IPR016143
all species →		Homologous_superfamilyCitrate synthase-like, small alpha subdomainInterproscan
IPR016142
all species →		Homologous_superfamilyCitrate synthase-like, large alpha subdomainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42871
all species →		CITRATE SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006099
all species →		Biological Processtricarboxylic acid cycleInterproscan
GO:0046912
all species →		Molecular Functionacyltransferase activity, acyl groups converted into alkyl on transferInterproscan
GO:0004108
all species →		Molecular Functioncitrate (Si)-synthase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01647CS, gltA; citrate synthaseEC:2.3.3.1
Glyoxylate and dicarboxylate metabolismko00630deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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