Detailed information of ANN35026-RA in Leptoseris scabra

Genomic Location: Scaffold_54__1_contigs__length_82578:71229...72449
NR annotation: WP_104001378.1, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase [Marinobacterium lutimaris]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9I3D2Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=sucB PE=3 SV=1
P20708Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Azotobacter vinelandii OX=354 GN=sucB PE=1 SV=2
P0AFG7Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Escherichia coli O157:H7 OX=83334 GN=sucB PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004517 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00198
all species →		2-oxoacid_dh2-oxoacid dehydrogenases acyltransferase (catalytic domain)DomainInterproscan
PF02817
all species →		E3_bindinge3 binding domainFamilyInterproscan
PF00364
all species →		Biotin_lipoylBiotin-requiring enzymeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004167
all species →		DomainPeripheral subunit-binding domainInterproscan
IPR001078
all species →		Domain2-oxoacid dehydrogenase acyltransferase, catalytic domainInterproscan
IPR011053
all species →		Homologous_superfamilySingle hybrid motifInterproscan
IPR003016
all species →		Binding_site2-oxo acid dehydrogenase, lipoyl-binding siteInterproscan
IPR006255
all species →		FamilyDihydrolipoamide succinyltransferaseInterproscan
IPR000089
all species →		DomainBiotin/lipoyl attachmentInterproscan
IPR036625
all species →		Homologous_superfamilyE3-binding domain superfamilyInterproscan
IPR023213
all species →		Homologous_superfamilyChloramphenicol acetyltransferase-like domain superfamilyInterproscan
IPR050537
all species →		Family2-oxoacid dehydrogenaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43416
all species →		DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016746
all species →		Molecular Functionacyltransferase activityInterproscan
GO:0004149
all species →		Molecular Functiondihydrolipoyllysine-residue succinyltransferase activityInterproscan
GO:0006099
all species →		Biological Processtricarboxylic acid cycleInterproscan
GO:0045252
all species →		Cellular Componentoxoglutarate dehydrogenase complexInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00658DLST, sucB; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)EC:2.3.1.61
Lipoic acid metabolismko00785deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP