Detailed information of ANN35027-RA in Leptoseris scabra

Genomic Location: Scaffold_54__1_contigs__length_82578:72492...75218
NR annotation: CAE7313242.1, lpdG [Symbiodinium pilosum]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P14218Dihydrolipoyl dehydrogenase OS=Pseudomonas fluorescens OX=294 GN=lpd PE=1 SV=3
Q9I3D1Dihydrolipoyl dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=lpdG PE=1 SV=1
P31052Dihydrolipoyl dehydrogenase OS=Pseudomonas putida OX=303 GN=lpdG PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002934 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02852
all species →
Pyr_redox_dimPyridine nucleotide-disulphide oxidoreductase, dimerisation domainDomainInterproscan
PF00549
all species →
Ligase_CoACoA-ligaseDomainInterproscan
PF08442
all species →
ATP-grasp_2ATP-grasp domainDomainInterproscan
PF07992
all species →
Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013815
all species →
Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR012999
all species →
Active_sitePyridine nucleotide-disulphide oxidoreductase, class I, active siteInterproscan
IPR050151
all species →
FamilyClass-I pyridine nucleotide-disulfide oxidoreductaseInterproscan
IPR004099
all species →
DomainPyridine nucleotide-disulphide oxidoreductase, dimerisation domainInterproscan
IPR005811
all species →
DomainATP-citrate synthase/succinyl-CoA ligase, C-terminal domainInterproscan
IPR036188
all species →
Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR013650
all species →
DomainATP-grasp fold, succinyl-CoA synthetase-typeInterproscan
IPR023753
all species →
DomainFAD/NAD(P)-binding domainInterproscan
IPR016102
all species →
Homologous_superfamilySuccinyl-CoA synthetase-likeInterproscan
IPR005809
all species →
FamilySuccinate--CoA ligase-like, beta subunitInterproscan
IPR016156
all species →
Homologous_superfamilyFAD/NAD-linked reductase, dimerisation domain superfamilyInterproscan
IPR006258
all species →
FamilyDihydrolipoamide dehydrogenaseInterproscan
IPR017866
all species →
Conserved_siteSuccinyl-CoA synthetase, beta subunit, conserved siteInterproscan
IPR011761
all species →
DomainATP-grasp foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22912
all species →
DISULFIDE OXIDOREDUCTASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0016668
all species →
Molecular Functionoxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptorInterproscan
GO:0004148
all species →
Molecular Functiondihydrolipoyl dehydrogenase activityInterproscan
GO:0050660
all species →
Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0003824
all species →
Molecular Functioncatalytic activityInterproscan
GO:0016491
all species →
Molecular Functionoxidoreductase activityInterproscan
GO:0006099
all species →
Biological Processtricarboxylic acid cycleInterproscan
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN35027-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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