Gene detail

Detailed information of ANN35028-RA in Leptoseris scabra

Genomic Location: Scaffold_54__1_contigs__length_82578:75317...76708
NR annotation: WP_253966484.1, succinate--CoA ligase subunit alpha [Gilvimarinus xylanilyticus]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q51567	Succinate--CoA ligase [ADP-forming] subunit alpha OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=sucD PE=1 SV=2
P0AGF1	Succinate--CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli O157:H7 OX=83334 GN=sucD PE=3 SV=2
P0AGF0	Succinate--CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=sucD PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02629	CoA_binding	CoA binding domain	Domain	Interproscan
PF00549	Ligase_CoA	CoA-ligase	Domain	Interproscan
PF03061	4HBT	Thioesterase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017440	Active_site	ATP-citrate lyase/succinyl-CoA ligase, active site	Interproscan
IPR016102	Homologous_superfamily	Succinyl-CoA synthetase-like	Interproscan
IPR029069	Homologous_superfamily	HotDog domain superfamily	Interproscan
IPR003781	Domain	CoA-binding	Interproscan
IPR005811	Domain	ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain	Interproscan
IPR003736	Domain	Phenylacetic acid degradation-related domain	Interproscan
IPR005810	Family	Succinyl-CoA ligase, alpha subunit	Interproscan
IPR006683	Domain	Thioesterase domain	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR033847	Conserved_site	ATP-citrate lyase/succinyl-CoA ligase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11117	SUCCINYL-COA LIGASE SUBUNIT ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004775	Molecular Function	succinate-CoA ligase (ADP-forming) activity	Interproscan
GO:0004776	Molecular Function	succinate-CoA ligase (GDP-forming) activity	Interproscan
GO:0006099	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0009361	Cellular Component	succinate-CoA ligase complex (ADP-forming)	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan