Detailed information of ANN35036-RA in Leptoseris scabra

Genomic Location: Scaffold_62__1_contigs__length_76242:34123...37068
NR annotation: HIP77782.1, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Kiloniellaceae bacterium]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B8GL96Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=gatB PE=3 SV=1
Q60CK9Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=gatB PE=3 SV=1
Q3J9M1Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107) OX=323261 GN=gatB PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0012687 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02934
all species →		GatB_NGatB/GatE catalytic domainDomainInterproscan
PF02637
all species →		GatB_YqeyGatB domainDomainInterproscan
PF01425
all species →		AmidaseAmidaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014746
all species →		Homologous_superfamilyGlutamine synthetase/guanido kinase, catalytic domainInterproscan
IPR036928
all species →		Homologous_superfamilyAmidase signature (AS) superfamilyInterproscan
IPR017959
all species →		FamilyAspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /EInterproscan
IPR023168
all species →		Homologous_superfamilyAspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2Interproscan
IPR018027
all species →		DomainAsn/Gln amidotransferaseInterproscan
IPR003789
all species →		Homologous_superfamilyAspartyl/glutamyl-tRNA amidotransferase subunit B-likeInterproscan
IPR006075
all species →		DomainAspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalyticInterproscan
IPR042114
all species →		Homologous_superfamilyAspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1Interproscan
IPR023631
all species →		DomainAmidase signature domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11659
all species →		GLUTAMYL-TRNA GLN AMIDOTRANSFERASE SUBUNIT B MITOCHONDRIAL AND PROKARYOTIC PET112-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0016884
all species →		Molecular Functioncarbon-nitrogen ligase activity, with glutamine as amido-N-donorInterproscan
GO:0032543
all species →		Biological Processmitochondrial translationInterproscan
GO:0050567
all species →		Molecular Functionglutaminyl-tRNA synthase (glutamine-hydrolyzing) activityInterproscan
GO:0070681
all species →		Biological Processglutaminyl-tRNAGln biosynthesis via transamidationInterproscan
GO:0016874
all species →		Molecular Functionligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN35036-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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