Gene detail

Detailed information of ANN35042-RA in Leptoseris scabra

Genomic Location: Scaffold_369__1_contigs__length_39488:365...1651
NR annotation: MBI1422493.1, glutamate-1-semialdehyde 2,1-aminomutase [Gammaproteobacteria bacterium]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2S8X9	Glutamate-1-semialdehyde 2,1-aminomutase OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=hemL PE=3 SV=1
A1TYG5	Glutamate-1-semialdehyde 2,1-aminomutase OS=Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=hemL PE=3 SV=1
Q3JDH7	Glutamate-1-semialdehyde 2,1-aminomutase OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107) OX=323261 GN=hemL PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0013550 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00202 all species →	Aminotran_3	Aminotransferase class-III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005814 all species →	Family	Aminotransferase class-III	Interproscan
IPR049704 all species →	Conserved_site	Aminotransferases class-III pyridoxal-phosphate attachment site	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR004639 all species →	Family	Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43713 all species →	GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008483 all species →	Molecular Function	transaminase activity	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0033014 all species →	Biological Process	tetrapyrrole biosynthetic process	Interproscan
GO:0042286 all species →	Molecular Function	glutamate-1-semialdehyde 2,1-aminomutase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01845	hemL; glutamate-1-semialdehyde 2,1-aminomutase	EC:5.4.3.8	Amino acid related enzymes	ko01007	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.