Detailed information of ANN35048-RA in Leptoseris scabra

Genomic Location: Scaffold_369__1_contigs__length_39488:20544...22799
NR annotation: WP_087459942.1, elongation factor Tu [Oleiphilus messinensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2S8Z8Elongation factor Tu OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=tuf1 PE=3 SV=1
C5BQ44Elongation factor Tu OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) OX=377629 GN=tuf PE=3 SV=1
Q0VSL7Elongation factor Tu OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) OX=393595 GN=tuf1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02357NusGTranscription termination factor nusGDomainInterproscan
PF03143GTP_EFTU_D3Elongation factor Tu C-terminal domainDomainInterproscan
PF00467KOWKOW motifFamilyInterproscan
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF03144GTP_EFTU_D2Elongation factor Tu domain 2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006645DomainNusG-like, N-terminalInterproscan
IPR036735Homologous_superfamilyNusG, N-terminal domain superfamilyInterproscan
IPR004160DomainTranslation elongation factor EFTu/EF1A, C-terminalInterproscan
IPR031157Conserved_siteTr-type G domain, conserved siteInterproscan
IPR009001Homologous_superfamilyTranslation elongation factor EF1A/initiation factor IF2gamma, C-terminalInterproscan
IPR014722Homologous_superfamilyLarge ribosomal subunit protein uL2, domain 2Interproscan
IPR004541FamilyTranslation elongation factor EFTu/EF1A, bacterial/organelleInterproscan
IPR047050DomainNusG, N-terminalInterproscan
IPR050055FamilyElongation factor Tu GTPaseInterproscan
IPR005824DomainKOWInterproscan
IPR001062FamilyTranscription antitermination protein, NusGInterproscan
IPR008991Homologous_superfamilyTranslation protein SH3-like domain superfamilyInterproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR041709DomainElongation factor Tu (EF-Tu), GTP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR015869Conserved_siteTranscription antitermination protein, NusG, bacteria, conserved siteInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR033720DomainElongation factor Tu, domain 2Interproscan
IPR004161DomainTranslation elongation factor EFTu-like, domain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43721ELONGATION FACTOR TU-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006354Biological ProcessDNA-templated transcription elongationInterproscan
GO:0140673Biological Processtranscription elongation-coupled chromatin remodelingInterproscan
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0006414Biological Processtranslational elongationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0032784Biological Processregulation of DNA-templated transcription elongationInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02358tuf, TUFM; elongation factor Tu-Exosomeko04147deepkoala

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