Detailed information of ANN35059-RA in Leptoseris scabra

Genomic Location: Scaffold_218__1_contigs__length_43989:10378...16436
NR annotation: WP_054552507.1, family 20 glycosylhydrolase [Pseudoalteromonas lipolytica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q04786Beta-hexosaminidase OS=Vibrio vulnificus OX=672 GN=hex PE=3 SV=1
P13670N,N'-diacetylchitobiase OS=Vibrio harveyi OX=669 GN=chb PE=1 SV=1
Q54468Chitobiase OS=Serratia marcescens OX=615 GN=chb PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21082MS_channel_3rdMechanosensitive ion channel MscS, C-terminalDomainInterproscan
PF03174CHB_HEX_CChitobiase/beta-hexosaminidase C-terminal domainDomainInterproscan
PF00924MS_channel_2ndMechanosensitive ion channel, beta-domainDomainInterproscan
PF02838Glyco_hydro_20bGlycosyl hydrolase family 20, domain 2DomainInterproscan
PF21088MS_channel_1stMechanosensitive ion channel, transmembrane helices 2/3DomainInterproscan
PF05552MS_channel_1st_1Mechanosensitive ion channel, conserved TM helixFamilyInterproscan
PF00728Glyco_hydro_20Glycosyl hydrolase family 20, catalytic domainDomainInterproscan
PF03173CHB_HEXPutative carbohydrate binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049278DomainMechanosensitive ion channel MscS, C-terminal domainInterproscan
IPR025705FamilyBeta-hexosaminidaseInterproscan
IPR004867DomainChitobiase C-terminal domainInterproscan
IPR008965Homologous_superfamilyCBM2/CBM3, carbohydrate-binding domain superfamilyInterproscan
IPR011066Homologous_superfamilyMechanosensitive ion channel MscS, C-terminal domain superfamilyInterproscan
IPR029018Homologous_superfamilyBeta-hexosaminidase-like, domain 2Interproscan
IPR023408Homologous_superfamilyMechanosensitive ion channel MscS, beta-domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR006685DomainMechanosensitive ion channel MscSInterproscan
IPR015882DomainBeta-hexosaminidase, bacterial type, N-terminalInterproscan
IPR049142DomainMechanosensitive ion channel, transmembrane helices 2/3Interproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR011014Homologous_superfamilyMechanosensitive ion channel MscS, transmembrane-2Interproscan
IPR004866DomainChitobiase/beta-hexosaminidases, N-terminal domainInterproscan
IPR008910RepeatMechanosensitive ion channel, conserved TM helixInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR012291Homologous_superfamilyCBM2, carbohydrate-binding domain superfamilyInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR015883DomainGlycoside hydrolase family 20, catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22600BETA-HEXOSAMINIDASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004563Molecular Functionbeta-N-acetylhexosaminidase activityInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030203Biological Processglycosaminoglycan metabolic processInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0030247Molecular Functionpolysaccharide bindingInterproscan

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