Gene detail

Detailed information of ANN35074-RA in Leptoseris scabra

Genomic Location: Scaffold_82__1_contigs__length_66967:57463...60361
NR annotation: KAF1853740.1, hypothetical protein Lal_00006995 [Lupinus albus]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN35074-RA

ATGGAACAAAATACTGCTCACCTACGCGCTTCTCCTATTGTCGGCTCGCTTGCTGCTCAAGATGTGGGTGATGATGTCTGTTATCGTGTTGCAGGAGATCATTTCTTACTGGTGGAGTATGGGCCTCCCGAACTTGATATTCGTTTACGCTTTCGCGCCCATGCCTTGATGCAATGGTTAGACGCTCATCCTATAACAGGCATTTGGGAACTAACACCTGGAATCCGTTCTCTGCAGATAAGCCAGCAACTAGAAACTTTATCGGTTCCATCTCGTGTCGTCCATTTACCTCTGAGCTGGAATGATAAAGCTTGCCAGCTTGCCATTGAGAAATACGAGCAATCTGTCCGTGAGAATGCGCCTTGGTGTCCGAGCAATTTAGAGTTTATTCGTCGCATTAATGGTTTAGCCGATATACAGGCGGTGAAAGATATTGTGTTTTCCGCGTCTTACCTTGTCATGGGTTTAGGCGATGTCTATTTAGGCGCACCTGTCGCTGTGCCTTTAGATCCAAGACATCGCTTAGTCACGACTAAATATAATCCTGCCAGAACTTGGACAGCTGAAAATTCCGTTGGCATTGGTGGTTCTTACTTATGCATTTATGGTATGGAAGGGCCAGGAGGGTACCAGTTTATTGGTCGTACTCTGCAAATGTGGAATCGCTATCAAAGCACCTCTGCCTTCACCAAACCTTGGCTACTTCGTTTCTTTGACCAAATTCGTTTTTTACGAATACCAGAAGGTTGTGTTGCTATCGACAGCTCTGTGAGTGGCAATGTCTGGGAAATTCTTGTGGCTACTGACGGCAGGGTTAACGCAGGAGATACTCTAGTTATTCTAGAATCTATGAAAATGGAAATCCCCATTGTGGCTAGCGTGGACGGATACCGTTTGGGCACTATGACACCTCGTCAGGTGGTAGAATATCTGTTAAATCGTCAGCAAAGCTATACAGCACATAATATATGGATTCATGCCTTAACGATGGACGAACTGGAGCCTTATTTAGAAGCCCTCGAAAAAAAATCCATGGACGATTGTCCGCTCTGGGGAATTCCTTTTGCCATTAAAGATAACATCGATTTGGCCGGTATACCGACAACAGCAGGCTGTGAGGCCTTTTCTTATATGCCAGAAAAGTCGGCTTTTGTCGTTCGTCAGCTTCTAAGTGCCGGCGCTATACCTGTTGGGAAAACGAATTTGGATCAATTTGCCACCGGGTTGGTGGGCACGCGTTCACCCTATGGGGTGTGCACAGATACCGCTGGATCTGGCCGTGTTCCTGCTGCTTTTAATAATCTTGTTGGTGTGAAACCCTCTCGTGGTCTCCTGTCTGGGACGGGTATGGTCCCTGCTTGCCGTAGTCTGGACTGTATGACGATTTTTGCTTTGCATTGTGATGACGCAGAACAGTCTGTCATAGCTGGGCTCACTAACGCCGGTATTCAACTAAAAGAGATTGATTATCATCTGTTTGATCAAGCGGCAAAGCTACTCTATGAAGGGCCTTGGGTGGCAGAACGTTATTTAGCGACTTCACCGCTTATTGAAGAGAGCCCAGAATCTTTCCTGGATGTGACCTATAAAATTATCTCTGCAGGGAAATCTTCCTCTGCCACAGACGCTTTTTCAGCTCAGTATCAACTCCAACAGATTAAGAAGCAGGTTGATCAACTTTTAACAACCGTTGACTGTTTTCTGACGCCTACAGCAGGTCGGCATTTTACCATCGATGAAATCACTGAAGACCCCATCGGAAGAAATTCTCAGTTAGGTTTTTACACCAATTATATGAATTTGTTGGATCTTGCTTCTCTAGCCATACCCGCAGGATTTACTCCGAATAAAACACCCTTTGGTATAACATTAGTGAGTGAAAAGTTTTCTGATCGCAAGCTGCTTTCTATTGGGCGTCGATTGCAGCAGCAATGGCAGTTATCCCTAGGCGCCATGGATTGGTCGTTACCTTCTTCAGCAGCTTCGAAGACACCCTTCGGCAAACCGAGTGATACTGTGATTCCCGTGGTGGTTTGTGGTGCCCACTTACAAGGGTTGCCCCTCAATTGGCAGCTTGTGGAAAGGCGTGCCGTCTTGTTAGAACAGACTAAGACGGCTGACTGTTATCGTATGTATGCGTTGGCTGGAGGACCTCCTTTTCGTCCAGGACTTATTTATGATGAAAATCACGGAGCCAGTATTGATGGTTGA

Transcript

ANN35074-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q936X2	Allophanate hydrolase OS=Pseudomonas sp. (strain ADP) OX=47660 GN=atzF PE=1 SV=1
P32528	Urea amidolyase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DUR1,2 PE=1 SV=2
A5H0J2	Urea amidolyase OS=Lachancea kluyveri OX=4934 GN=DUR1,2 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0013440 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02682 all species →	CT_C_D	Carboxyltransferase domain, subdomain C and D	Family	Interproscan
PF01425 all species →	Amidase	Amidase	Family	Interproscan
PF00364 all species →	Biotin_lipoyl	Biotin-requiring enzyme	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029000 all species →	Homologous_superfamily	Cyclophilin-like domain superfamily	Interproscan
IPR000120 all species →	Family	Amidase	Interproscan
IPR003833 all species →	Domain	Carboxyltransferase domain, subdomain C and D	Interproscan
IPR036928 all species →	Homologous_superfamily	Amidase signature (AS) superfamily	Interproscan
IPR011053 all species →	Homologous_superfamily	Single hybrid motif	Interproscan
IPR023631 all species →	Domain	Amidase signature domain	Interproscan
IPR000089 all species →	Domain	Biotin/lipoyl attachment	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11895 all species →	TRANSAMIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN35074-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.